Structure and fragmentation chemistry of the peptide radical cations of glycylphenylalanylglycine (GFG)

PLoS One. 2024 Aug 13;19(8):e0308164. doi: 10.1371/journal.pone.0308164. eCollection 2024.

Abstract

Herein, we explore the generation and characterization of the radical cations of glycylphenylalanylglycine, or [GFG]•+, formed via dissociative electron-transfer reaction from the tripeptide to copper(II) within a ternary complex. A comprehensive investigation employing isotopic labeling, infrared multiple-photon dissociation (IRMPD) spectroscopy, and density functional theory (DFT) calculations elucidated the details and energetics in formation of the peptide radical cations as well as their dissociation products. Unlike conventional aromatic-containing peptide radical cations that primarily form canonical π-radicals, our findings reveal that 75% of the population of the experimentally produced [GFG]•+ precursors are [GFα•G]+, where the radical resides on the middle α-carbon of the phenylalanyl residue. This unexpected isomeric ion has an enthalpy of 6.8 kcal/mol above the global minimum, which has an N-terminal captodative structure, [Gα•FG]+, comprising 25% of the population. The [b₂-H]•+ product ions are also present in a ratio of 75/25 from [GFα•G]+/ [Gα•FG]+, the results of which are obtained from matches between the IRMPD action spectrum and predicted IR absorption spectra of the [b₂-H]•+ candidate structures, as well as from IRMPD isomer population analyses.

MeSH terms

  • Cations* / chemistry
  • Copper / chemistry
  • Free Radicals / chemistry
  • Oligopeptides / chemistry
  • Peptides / chemistry
  • Thermodynamics

Substances

  • Cations
  • Free Radicals
  • Copper
  • Peptides
  • Oligopeptides

Grants and funding

the Hong Kong Research Grants Council (HKU 17303821 and HKU 17304919), the Natural Sciences and Engineering Research Council of Canada, the Digital Research Alliance of Canada, the Netherlands Organization for Scientific Research, Radboud University, the University of Windsor, the Shandong Science and Technology Department, and the Shandong Public Health Clinical Center Affiliated to Shandong University. The authors have declared that no competing interests exist and the funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.