Biological and genomic characterization of the novel bacteriophage vB_VpM-pA2SJ1, which infects Vibrio parahaemolyticus associated with acute hepatopancreatic necrosis disease

Arch Virol. 2024 Sep 11;169(10):196. doi: 10.1007/s00705-024-06121-4.

Abstract

Vibrio parahaemolyticus is a major seafood-borne zoonotic pathogen that causes gastroenteritis in humans and acute hepatopancreatic necrosis disease (AHPND) in shrimp. In this study, we isolated and characterized Vibrio phage vB_VpM-pA2SJ1, which infects clinical and AHPND-associated strains of V. parahaemolyticus. The phage genome is a linear dsDNA 51,054 bp in length with a G + C content of 43.7%, and it contains 89 open reading frames. Genome comparisons revealed basal similarity to other Vibrio phages, particularly Vibrio phage vB_VpP_1, with 84.2% identity and 46% coverage. Phylogenetic analysis based on the whole genome, the terminase large subunit, and the major capsid protein revealed that phage vB_VpM-pA2SJ1 did not cluster with other known phage families, thus indicating its uniqueness.

MeSH terms

  • Animals
  • Bacteriophages* / classification
  • Bacteriophages* / genetics
  • Bacteriophages* / isolation & purification
  • Base Composition*
  • DNA, Viral / genetics
  • Genome, Viral*
  • Hepatopancreas / microbiology
  • Hepatopancreas / pathology
  • Hepatopancreas / virology
  • Open Reading Frames*
  • Penaeidae / microbiology
  • Penaeidae / virology
  • Phylogeny*
  • Vibrio Infections / microbiology
  • Vibrio Infections / veterinary
  • Vibrio Infections / virology
  • Vibrio parahaemolyticus* / genetics
  • Vibrio parahaemolyticus* / virology

Substances

  • DNA, Viral