Architecture of CTPS filament networks revealed by cryo-electron tomography

Exp Cell Res. 2024 Oct 1;442(2):114262. doi: 10.1016/j.yexcr.2024.114262. Epub 2024 Sep 19.

Abstract

The cytoophidium is a novel type of membraneless organelle, first observed in the ovaries of Drosophila using fluorescence microscopy. In vitro, purified Drosophila melanogaster CTPS (dmCTPS) can form metabolic filaments under the presence of either substrates or products, and their structures that have been analyzed using cryo-electron microscopy (cryo-EM). These dmCTPS filaments are considered the fundamental units of cytoophidia. However, due to the resolution gap between light and electron microscopy, the precise assembly pattern of cytoophidia remains unclear. In this study, we find that dmCTPS filaments can spontaneously assemble in vitro, forming network structures that reach micron-scale dimensions. Using cryo-electron tomography (cryo-ET), we reconstruct the network structures formed by dmCTPS filaments under substrate or product binding conditions and elucidate their assembly process. The dmCTPS filaments initially form structural bundles, which then further assemble into larger networks. By identifying, tracking, and statistically analyzing the filaments, we observed distinct characteristics of the structural bundles formed under different conditions. This study provides the first systematic analysis of dmCTPS filament networks, offering new insights into the relationship between cytoophidia and metabolic filaments.

Keywords: CTPS; CTPS filament network; Cryo-electron microscopy; Cryo-electron tomography; Cytoophidium; Metabolic filament.

MeSH terms

  • Animals
  • Carbon-Nitrogen Ligases
  • Cryoelectron Microscopy* / methods
  • Cytoskeleton / metabolism
  • Cytoskeleton / ultrastructure
  • Drosophila Proteins / chemistry
  • Drosophila Proteins / metabolism
  • Drosophila Proteins / ultrastructure
  • Drosophila melanogaster* / ultrastructure
  • Electron Microscope Tomography* / methods
  • Female
  • Organelles / metabolism
  • Organelles / ultrastructure

Substances

  • CTP synthetase
  • Drosophila Proteins
  • Carbon-Nitrogen Ligases