Transcriptomic data sets for Novosphingobium aromaticivorans grown with the β-5-linked aromatic dimer dehydrodiconiferyl alcohol and the related G-aromatic monomers vanillin and ferulic acid

Fletcher Metz; Kevin S Myers; Fachuang Lu; Daniel R Noguera; Timothy J Donohue

doi:10.1128/mra.00845-24

Transcriptomic data sets for Novosphingobium aromaticivorans grown with the β-5-linked aromatic dimer dehydrodiconiferyl alcohol and the related G-aromatic monomers vanillin and ferulic acid

Microbiol Resour Announc. 2024 Nov 12;13(11):e0084524. doi: 10.1128/mra.00845-24. Epub 2024 Oct 4.

Authors

Fletcher Metz^{1

2

3}, Kevin S Myers^{1

2}, Fachuang Lu^{1

2}, Daniel R Noguera^{1

2

4}, Timothy J Donohue^{1

2

5}

Affiliations

¹ DOE Great Lakes Bioenergy Research Center, University of Wisconsin, Madison, Wisconsin, USA.
² Wisconsin Energy Institute, University of Wisconsin, Madison, Wisconsin, USA.
³ Laboratory of Genetics, University of Wisconsin, Madison, Wisconsin, USA.
⁴ Department of Civil and Environmental Engineering, University of Wisconsin, Madison, Wisconsin, USA.
⁵ Department of Bacteriology, University of Wisconsin, Madison, Wisconsin, USA.

Abstract

The transcriptomes of a 2-pyrone-4,6-dicarboxylic acid-producing strain of Novosphingobium aromaticivorans DSM12444 were determined when grown in minimal medium containing glucose alone or glucose plus vanillin, ferulic acid, or the β-5-linked aromatic dimer dehydrodiconiferyl alcohol as carbon sources. Here, we present the RNA-sequencing data we obtained.

Keywords: aromatic compounds; genetics; genomics; ligninolysis.

Abstract

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