Identification of Phospholipids Relevant to Cancer Tissue Using Differential Ion Mobility Spectrometry

Int J Mol Sci. 2024 Oct 13;25(20):11002. doi: 10.3390/ijms252011002.

Abstract

Phospholipids are the main building components of cell membranes and are also used for cell signaling and as energy storages. Cancer cells alter their lipid metabolism, which ultimately leads to an increase in phospholipids in cancer tissue. Surgical energy instruments use electrical or vibrational energy to heat tissues, which causes intra- and extracellular water to expand rapidly and degrade cell structures, bursting the cells, which causes the formation of a tissue aerosol or smoke depending on the amount of energy used. This gas phase analyte can then be analyzed via gas analysis methods. Differential mobility spectrometry (DMS) is a method that can be used to differentiate malignant tissue from benign tissues in real time via the analysis of surgical smoke produced by energy instruments. Previously, the DMS identification of cancer tissue was based on a 'black box method' by differentiating the 2D dispersion plots of samples. This study sets out to find datapoints from the DMS dispersion plots that represent relevant target molecules. We studied the ability of DMS to differentiate three subclasses of phospholipids (phosphatidylcholine, phosphatidylinositol, and phosphatidylethanolamine) from a control sample using a bovine skeletal muscle matrix with a 5 mg addition of each phospholipid subclass to the sample matrix. We trained binary classifiers using linear discriminant analysis (LDA) and support vector machines (SVM) for sample classification. We were able to identify phosphatidylcholine, -inositol, and -ethanolamine with SVM binary classification accuracies of 91%, 73%, and 66% and with LDA binary classification accuracies of 82%, 74%, and 72%, respectively. Phosphatidylcholine was detected with a reliable classification accuracy, but ion separation setups should be adjusted in future studies to reliably detect other relevant phospholipids such as phosphatidylinositol and phosphatidylethanolamine and improve DMS as a microanalysis method and identify other phospholipids relevant to cancer tissue.

Keywords: cancer; differential mobility spectrometry; field asymmetric ion mobility spectrometry; phospholipid.

MeSH terms

  • Animals
  • Cattle
  • Discriminant Analysis
  • Humans
  • Ion Mobility Spectrometry* / methods
  • Muscle, Skeletal / metabolism
  • Neoplasms* / metabolism
  • Phosphatidylethanolamines / analysis
  • Phosphatidylethanolamines / metabolism
  • Phospholipids* / analysis
  • Phospholipids* / metabolism
  • Support Vector Machine

Substances

  • Phospholipids
  • Phosphatidylethanolamines

Grants and funding

This study has received funding from the ATTRACT project funded by the European Commission from the Horizon 2020 research and innovation program (grant agreement 777222). This study was also financially supported by Competitive State Research Financing of the Expert Responsibility Area of Tampere University Hospital and Pirkanmaa Hospital District (grant numbers 9AA057, 9 × 040, 9v044, 9T044, 9U042, 9s045, 150618, 151B03). Competitive funding to strengthen university research profiles was funded by the Academy of Finland (decision number 292477); Tampere Tuberculosis Foundation; and Sigrid Juselius foundation. The APC was funded by Tampere university.