Porcine reproductive and respiratory syndrome virus nonstructural protein 2 promotes the autophagic degradation of adaptor protein SH3KBP1 to antagonize host innate immune responses by enhancing K63-linked polyubiquitination of RIG-I

PLoS Pathog. 2024 Oct 28;20(10):e1012670. doi: 10.1371/journal.ppat.1012670. eCollection 2024 Oct.

Abstract

Non-structural protein 2 (NSP2) of PRRSV is highly variable and plays crucial roles in the virus's life cycle. To elucidate the function of NSP2 during PRRSV infection, we identified SH3KBP1 as an NSP2-interacting host protein using mass spectrometry. Exogenous SH3KBP1 expression significantly inhibited PRRSV replication by enhancing IFN-I and related ISGs production. Conversely, SH3KBP1 knockdown promoted viral replication by downregulating IFN-I and ISGs levels. In vivo experiments revealed that Sh3kbp1-/- mice were more susceptible to VSV infection, exhibiting reduced serum IFN-β levels. Further investigation showed that SH3KBP1 enhances RIG-I signal transduction by increasing K63-linked polyubiquitination through interaction with the E3 ubiquitin ligase TRIM25. We also found that PRRSV infection and NSP2 overexpression induce the autophagic degradation of SH3KBP1, counteracting the host's innate immune response. A critical interaction site was identified within the third polyproline-arginine motif in NSP2 (453PVPAPR458). Recombinant PRRSV lacking this motif displayed reduced virulence and decreased SH3KBP1 degradation. This study advances our understanding of how PRRSV interferes with the host immune response and offers valuable insights for developing novel attenuated vaccines against PRRSV.

MeSH terms

  • Adaptor Proteins, Signal Transducing / genetics
  • Adaptor Proteins, Signal Transducing / immunology
  • Adaptor Proteins, Signal Transducing / metabolism
  • Animals
  • Autophagy*
  • DEAD Box Protein 58* / metabolism
  • DNA-Binding Proteins
  • HEK293 Cells
  • Humans
  • Immunity, Innate*
  • Mice
  • Mice, Inbred C57BL
  • Mice, Knockout*
  • Porcine Reproductive and Respiratory Syndrome* / immunology
  • Porcine Reproductive and Respiratory Syndrome* / metabolism
  • Porcine Reproductive and Respiratory Syndrome* / virology
  • Porcine respiratory and reproductive syndrome virus* / immunology
  • Swine
  • Transcription Factors
  • Tripartite Motif Proteins / genetics
  • Tripartite Motif Proteins / metabolism
  • Ubiquitin-Protein Ligases / genetics
  • Ubiquitin-Protein Ligases / metabolism
  • Ubiquitination*
  • Viral Nonstructural Proteins* / genetics
  • Viral Nonstructural Proteins* / immunology
  • Viral Nonstructural Proteins* / metabolism
  • Virus Replication

Substances

  • Viral Nonstructural Proteins
  • DEAD Box Protein 58
  • Ubiquitin-Protein Ligases
  • Tripartite Motif Proteins
  • Trim25 protein, mouse
  • Adaptor Proteins, Signal Transducing
  • DNA-Binding Proteins
  • Transcription Factors

Grants and funding

This work was supported by the Key Development and Research Foundation of Gansu province, China (22ZD6NA001 to Z.L.), the grants from the Joint-Foundation of Gansu province, China (23JRRA1476 to Z.L.), and the Agricultural Science and Technology Innovation Program of CAAS (CAAS-ASTIP-2022-LVRI to Z.L.). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.