Draft genomes of the bile duct microbiome strains Klebsiella pneumoniae and Enterococcus lactis isolated from bilioenteric drainages with biofilm-forming abilities

Güel Dumann; Oliver Rohland; Mostafa Y Abdel-Glil; Rosalind J Allen; Michael Bauer; Anne Busch

doi:10.1128/mra.00202-24

Draft genomes of the bile duct microbiome strains Klebsiella pneumoniae and Enterococcus lactis isolated from bilioenteric drainages with biofilm-forming abilities

Microbiol Resour Announc. 2024 Dec 12;13(12):e0020224. doi: 10.1128/mra.00202-24. Epub 2024 Oct 29.

Authors

Güel Dumann¹, Oliver Rohland², Mostafa Y Abdel-Glil³, Rosalind J Allen^{1

4}, Michael Bauer^{4

5}, Anne Busch^{1

4

5}

Affiliations

¹ Theoretical Microbial Ecology, Friedrich Schiller University, Jena, Germany.
² Department of General, Visceral and Vascular Surgery, Jena University Hospital, Jena, Germany.
³ Friedrich-Loeffler-Institute, Institute of Bacterial Infections and Zoonoses (IBIZ), Jena, Germany.
⁴ Cluster of Excellence Balance of the Microverse, Friedrich Schiller University Jena, Jena, Germany.
⁵ Department of Anaesthesiology and Intensive Care Medicine, University Hospital Jena, Jena, Germany.

Abstract

We describe the genetic properties of two strains isolated from the elusive bile duct microbiome from solid organ transplant patients. Bacterial strains Enterococcus lactis (MS-STENT-08-E-001) and Klebsiella pneumoniae (MS-STENT-01-M-001) were isolated from the biofilms of bile duct catheters.

Keywords: Enterococcus; Klebsiella; antibiotic resistance; bile duct; biofilms; genome analysis; human microbiome.

Grants and funding

EXC 2051 - Project-ID 390713860/Deutsche Forschungsgemeinschaft (DFG)