A hierarchical hepatic de novo lipogenesis substrate supply network utilizing pyruvate, acetate, and ketones

Cell Metab. 2025 Jan 7;37(1):255-273.e6. doi: 10.1016/j.cmet.2024.10.013. Epub 2024 Oct 28.

Abstract

Hepatic de novo lipogenesis (DNL) is a fundamental physiologic process that is often pathogenically elevated in metabolic disease. Treatment is limited by incomplete understanding of the metabolic pathways supplying cytosolic acetyl-CoA, the obligate precursor to DNL, including their interactions and proportional contributions. Here, we combined extensive 13C tracing with liver-specific knockout of key mitochondrial and cytosolic proteins mediating cytosolic acetyl-CoA production. We show that the mitochondrial pyruvate carrier (MPC) and ATP-citrate lyase (ACLY) gate the major hepatic lipogenic acetyl-CoA production pathway, operating in parallel with acetyl-CoA synthetase 2 (ACSS2). Given persistent DNL after mitochondrial citrate carrier (CiC) and ACSS2 double knockout, we tested the contribution of exogenous and leucine-derived acetoacetate to acetoacetyl-CoA synthetase (AACS)-dependent DNL. CiC knockout increased acetoacetate-supplied hepatic acetyl-CoA production and DNL, indicating that ketones function as mitochondrial-citrate reciprocal DNL precursors. By delineating a mitochondrial-cytosolic DNL substrate supply network, these findings may inform strategies to therapeutically modulate DNL.

Keywords: AACS; ACLY; ACSS2; ATP-citrate lyase; CiC; DNL; MPC; acetoacetyl-CoA synthetase; acetyl-CoA synthetase 2; de novo lipogenesis; liver; metabolomics; mitochondrial citrate carrier; mitochondrial pyruvate carrier; stable isotope tracers.

MeSH terms

  • ATP Citrate (pro-S)-Lyase / genetics
  • ATP Citrate (pro-S)-Lyase / metabolism
  • Acetate-CoA Ligase / genetics
  • Acetate-CoA Ligase / metabolism
  • Acetates / metabolism
  • Acetoacetates
  • Acetyl Coenzyme A / metabolism
  • Animals
  • Ketones / metabolism
  • Lipogenesis*
  • Liver* / metabolism
  • Male
  • Mice
  • Mice, Knockout*
  • Mitochondria / metabolism
  • Mitochondrial Membrane Transport Proteins / genetics
  • Mitochondrial Membrane Transport Proteins / metabolism
  • Monocarboxylic Acid Transporters / genetics
  • Monocarboxylic Acid Transporters / metabolism
  • Pyruvic Acid* / metabolism

Substances

  • Pyruvic Acid
  • Acetyl Coenzyme A
  • ATP Citrate (pro-S)-Lyase
  • Ketones
  • Acetates
  • Acetate-CoA Ligase
  • Mitochondrial Membrane Transport Proteins
  • Monocarboxylic Acid Transporters
  • acetoacetic acid
  • ACSS2 protein, mouse
  • Acetoacetates