Machine learning algorithms able to predict the prognosis of gastric cancer patients treated with immune checkpoint inhibitors

World J Gastroenterol. 2024 Oct 28;30(40):4354-4366. doi: 10.3748/wjg.v30.i40.4354.

Abstract

Background: Although immune checkpoint inhibitors (ICIs) have demonstrated significant survival benefits in some patients diagnosed with gastric cancer (GC), existing prognostic markers are not universally applicable to all patients with advanced GC.

Aim: To investigate biomarkers that predict prognosis in GC patients treated with ICIs and develop accurate predictive models.

Methods: Data from 273 patients diagnosed with GC and distant metastasis, who un-derwent ≥ 1 cycle(s) of ICIs therapy were included in this study. Patients were randomly divided into training and test sets at a ratio of 7:3. Training set data were used to develop the machine learning models, and the test set was used to validate their predictive ability. Shapley additive explanations were used to provide insights into the best model.

Results: Among the 273 patients with GC treated with ICIs in this study, 112 died within 1 year, and 129 progressed within the same timeframe. Five features related to overall survival and 4 related to progression-free survival were identified and used to construct eXtreme Gradient Boosting (XGBoost), logistic regression, and decision tree. After comprehensive evaluation, XGBoost demonstrated good accuracy in predicting overall survival and progression-free survival.

Conclusion: The XGBoost model aided in identifying patients with GC who were more likely to benefit from ICIs therapy. Patient nutritional status may, to some extent, reflect prognosis.

Keywords: Gastric cancer; Immune checkpoint inhibitors; Machine learning; Overall survival; Progression-free survival; Web-based calculator.

MeSH terms

  • Adult
  • Aged
  • Aged, 80 and over
  • Algorithms
  • Biomarkers, Tumor / analysis
  • Decision Trees
  • Female
  • Humans
  • Immune Checkpoint Inhibitors* / adverse effects
  • Immune Checkpoint Inhibitors* / therapeutic use
  • Machine Learning*
  • Male
  • Middle Aged
  • Predictive Value of Tests
  • Prognosis
  • Progression-Free Survival
  • Retrospective Studies
  • Stomach Neoplasms* / drug therapy
  • Stomach Neoplasms* / immunology
  • Stomach Neoplasms* / mortality
  • Stomach Neoplasms* / pathology

Substances

  • Immune Checkpoint Inhibitors
  • Biomarkers, Tumor