Use of the Puccinia sorghi haustorial transcriptome to identify and characterize AvrRp1-D recognized by the maize Rp1-D resistance protein

PLoS Pathog. 2024 Nov 8;20(11):e1012662. doi: 10.1371/journal.ppat.1012662. eCollection 2024 Nov.

Abstract

The common rust disease of maize is caused by the obligate biotrophic fungus Puccinia sorghi. The maize Rp1-D allele imparts resistance against the P. sorghi IN2 isolate by initiating a defense response that includes a rapid localized programmed cell death process, the hypersensitive response (HR). In this study, to identify AvrRp1-D from P. sorghi IN2, we employed the isolation of haustoria, facilitated by a biotin-streptavidin interaction, as a powerful approach. This method proves particularly advantageous in cases where the genome information for the fungal pathogen is unavailable, enhancing our ability to explore and understand the molecular interactions between maize and P. sorghi. The haustorial transcriptome generated through this technique, in combination with bioinformatic analyses such as SignalP and TMHMM, enabled the identification of 251 candidate effectors. We ultimately identified two closely related genes, AvrRp1-D.1 and AvrRp1-D.2, which triggered an Rp1-D-dependent defense response in Nicotiana benthamiana. AvrRp1-D-induced Rp1-D-dependent HR was further confirmed in maize protoplasts. We demonstrated that AvrRp1-D.1 interacts directly and specifically with the leucine-rich repeat (LRR) domain of Rp1-D through yeast two-hybrid assay. We also provide evidence that, in the absence of Rp1-D, AvrRp1-D.1 plays a role in suppressing the plant immune response. Our research provides valuable insights into the molecular interactions driving resistance against common rust in maize.

MeSH terms

  • Disease Resistance* / genetics
  • Fungal Proteins / genetics
  • Fungal Proteins / metabolism
  • Plant Diseases* / genetics
  • Plant Diseases* / microbiology
  • Plant Proteins* / genetics
  • Plant Proteins* / metabolism
  • Puccinia*
  • Transcriptome*
  • Zea mays* / genetics
  • Zea mays* / microbiology

Substances

  • Plant Proteins
  • Fungal Proteins

Grants and funding

This work was supported by grants from National Institute of Food and Agriculture (NIFA) (award #2022-67013-36504) to RD, PB-K, S-BK, the United States Department of Agriculture, Agricultural Research Service (USDA-ARS) research project 5020-21220-014-00D to MH and National Science Foundation (NSF IOS-2126256) to E.P, J.C. This work was supported by the National Research Foundation (NRF) of Korea grant (2018R1A5A1023599, SRC) to E.P and D.C. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.