Comparative Analysis of Commercial and Home-Made Media on RSPO1/S6R Axis in Organoids with Different Wnt Backgrounds: A Methodological Guide for the Selection of Intestinal Patient-Derived Organoids Culture Media

Int J Mol Sci. 2024 Oct 26;25(21):11526. doi: 10.3390/ijms252111526.

Abstract

WNT3A is an intestinal ligand triggering the Wnt/β-catenin (Wnt) pathway, which can be enhanced by R-spondin 1 (RSPO1) through the RSPO1-LGR axis or antagonized by the adenomatous polyposis coli (APC) protein supporting β-catenin-degradation. Wnt interplays with several pathways including PI3K/mTOR (mTOR). In this study, we evaluated the influence of WNT3A-commercial and home-made culture media and RSPO1 protein on the Wnt and mTOR interplay in non-APC and APC-mutated intestinal patient-derived organoids (PDOs). Normal mucosa (NM) of sporadic CRC and FAP PDOs were cultured with: WNT3A-lacking/containing commercial (A/A+B) or home-made (BASAL/WNT3A-conditioned medium (CM)±RSPO1) media. In non-APC-mutated-PDOs (CRC-NM), WNT3A-CM, over commercial A+B, strongly activated Wnt-target-genes CCND1 and c-MYC. Most importantly, the addition of RSPO1 to home-made WNT3A-CM or A+B led to the downregulation of the mTOR-downstream-effector phospho-S6 ribosomal protein (p-S6R), highlighting the activation of the RSPO1-pS6R in both non-APC (CRC-NM) and APC-mutated (FAP-NM) PDOs, independently from LGR5 gene expression modulation. Our work demonstrates that home-made WNT3A-CM strongly impacts the crosstalk between Wnt and mTOR over commercial media, and proposes RSPO1 as a key regulator of the RSPO1-p-S6R axis in both non-APC and APC-mutated PDOs. Together, these findings represent an important methodological guide for scientists working in these fields to select the most appropriate intestinal PDO media.

Keywords: R-spondin 1 (RSPO1); colorectal cancer (CRC); intestinal patient-derived organoid (PDO); organoids culture media; phospho-S6 ribosomal protein (p-S6R).

Publication types

  • Comparative Study

MeSH terms

  • Adenomatous Polyposis Coli / genetics
  • Adenomatous Polyposis Coli / metabolism
  • Adenomatous Polyposis Coli Protein / genetics
  • Adenomatous Polyposis Coli Protein / metabolism
  • Culture Media / chemistry
  • Culture Media / pharmacology
  • Culture Media, Conditioned / pharmacology
  • Humans
  • Intestinal Mucosa / cytology
  • Intestinal Mucosa / metabolism
  • Organoids* / cytology
  • Organoids* / metabolism
  • TOR Serine-Threonine Kinases / metabolism
  • Thrombospondins* / genetics
  • Thrombospondins* / metabolism
  • Wnt Signaling Pathway*
  • Wnt3A Protein / genetics
  • Wnt3A Protein / metabolism
  • beta Catenin / genetics
  • beta Catenin / metabolism

Substances

  • RSPO1 protein, human
  • Thrombospondins
  • Wnt3A Protein
  • TOR Serine-Threonine Kinases
  • Culture Media
  • WNT3A protein, human
  • Culture Media, Conditioned
  • Adenomatous Polyposis Coli Protein
  • MTOR protein, human
  • beta Catenin