ZBTB48 is a priming factor regulating B-cell-specific CIITA expression

EMBO J. 2024 Dec;43(24):6236-6263. doi: 10.1038/s44318-024-00306-y. Epub 2024 Nov 19.

Abstract

The class-II transactivator (CIITA) is the master regulator of MHC class-II gene expression and hence the adaptive immune response. Three cell type-specific promoters (pI, pIII, and pIV) are involved in the regulation of CIITA expression, which can be induced by IFN-γ in non-immune cells. While key regulatory elements have been identified within these promoters, our understanding of the transcription factors regulating CIITA expression is incomplete. Here, we demonstrate that the telomere-binding protein and transcriptional activator ZBTB48 directly binds to both critical activating elements within the B-cell-specific promoter CIITA pIII. ZBTB48 knockout impedes the CIITA/MHC-II expression program induced in non-APC cells by IFN-γ, and loss of ZBTB48 in mice silences MHC-II expression in pro-B and immature B cells. Transcriptional regulation of CIITA by ZBTB48 is enabled by ZBTB48-dependent chromatin opening at CIITA pIII upstream of activating H3K4me3 marks. We conclude that ZBTB48 primes CIITA pIII by acting as a molecular on-off-switch for B-cell-specific CIITA expression.

Keywords: B Cell; CIITA; Epigenetics; Gene Expression; MHC II.

MeSH terms

  • Animals
  • B-Lymphocytes* / immunology
  • B-Lymphocytes* / metabolism
  • Gene Expression Regulation*
  • Humans
  • Interferon-gamma / genetics
  • Interferon-gamma / metabolism
  • Mice
  • Mice, Inbred C57BL
  • Mice, Knockout
  • Nuclear Proteins* / genetics
  • Nuclear Proteins* / metabolism
  • Promoter Regions, Genetic*
  • Trans-Activators* / genetics
  • Trans-Activators* / metabolism
  • Transcription Factors* / genetics
  • Transcription Factors* / metabolism

Substances

  • MHC class II transactivator protein
  • Trans-Activators
  • Nuclear Proteins
  • Transcription Factors
  • Interferon-gamma