The ternary complex of Mn2+, synthetic decapeptide DP1 (DEHGTAVMLK), and orthophosphate is a superb antioxidant

Proc Natl Acad Sci U S A. 2024 Dec 17;121(51):e2417389121. doi: 10.1073/pnas.2417389121. Epub 2024 Dec 12.

Abstract

Mn2+ coordinated by orthophosphate (Pi), metabolites, or peptides acts as a superoxide dismutase (SOD), and these Mn antioxidant complexes are universally accumulated in extremely radiation-resistant cell types across the tree of life. This behavior prompted design of decapeptide DP1 (DEHGTAVMLK) as a Mn2+ ligand, and development of a highly potent Mn2+-antioxidant (MDP) containing [Pi] = 25 mM, and [DP1] = 3 mM, the ratio found in the radioresistant bacterium Deinococcus radiodurans, with [Mn2+] = 1 mM. MDP is an exceptional antioxidant, both in vitro and in vivo, and has reinvigorated the development of radiation-inactivated whole-cell vaccines. This study investigates the nature of the active Mn2+ complex in MDP. We measure the affinity of DP1 for the substitutionally labile Mn2+ ion using isothermal-titration calorimetry (ITC) and use changes in the Mn2+ solution EPR spectrum to determine affinities of Mn2+ for DP1 and for Pi, and to monitor Mn2+ ligation while titrated with the fixed Pi/DP1 ratio of MDP, 25/3, using ENDOR/ESEEM to characterize DP1 ligation to Mn2+. In parallel, 1H NMR of DP1 was used to monitor binding interactions between Pi and DP1, and DP1 binding to the diamagnetic Ca2+. We report: i) DP1 forms an extremely weak, dynamic Mn2+ complex (Ka ≈ 40 M-1) ii) Mn2+ binds Pi much more strongly (Ka ≈ 390 M-1) as shown previously, but iii) DP1 and Pi jointly bind to Mn2+ in MDP to form a ternary Mn2+ (Pi) (DP1) complex with greater formation-constant than Pi alone (Kaapp ≈ 670 M-1). It is this ternary complex that is the superb antioxidant in MDP.

Keywords: EPR; NMR; isothermal calorimetry; manganese SOD; manganese antioxidant.

MeSH terms

  • Antioxidants* / chemistry
  • Antioxidants* / metabolism
  • Deinococcus* / metabolism
  • Electron Spin Resonance Spectroscopy
  • Manganese* / chemistry
  • Manganese* / metabolism
  • Oligopeptides* / chemistry
  • Oligopeptides* / metabolism
  • Phosphates* / chemistry
  • Phosphates* / metabolism
  • Superoxide Dismutase / metabolism

Substances

  • Manganese
  • Antioxidants
  • Phosphates
  • Oligopeptides
  • Superoxide Dismutase