Altered X-chromosome inactivation of the TLR7/8 locus and heterogeneity of pDCs in systemic sclerosis

J Exp Med. 2025 Mar 3;222(3):e20231809. doi: 10.1084/jem.20231809. Epub 2024 Dec 13.

Abstract

Systemic sclerosis (SSc) is an autoimmune disease that has a strong female predominance. Both the X-linked TLR7 and TLR8 can induce type I IFN (IFN-I) by plasmacytoid DCs (pDCs), which can promote fibrosis. We identified five subclusters of pDCs, including ISGhigh clusters that were over-represented in SSc patients. We observed that both TLR7 and TLR8 genes escape from X chromosome inactivation (XCI) at higher frequency in pDCs of SSc patients, which was associated with changes in TLR7 protein profile. Combined DNA/RNA FISH analysis revealed that the TLR7/8 locus is preferentially located outside of the inactive X (Xi) territory when TLR7 is expressed, suggesting that higher-order loop formation is linked to TLR7/8 expression from the Xi. Furthermore, the expression levels of XIST and the transcriptional repressor SPEN were reduced in SSc pDCs. Hence, our data revealed the heterogeneity of pDCs in SSc and suggested that altered XCI at the TLR7/8 locus may contribute to the chronic IFN-I activity of pDCs in female SSc patients.

MeSH terms

  • Adult
  • Aged
  • Dendritic Cells* / immunology
  • Dendritic Cells* / metabolism
  • Female
  • Genetic Loci
  • Humans
  • Interferon Type I / metabolism
  • Male
  • Middle Aged
  • RNA, Long Noncoding / genetics
  • RNA, Long Noncoding / metabolism
  • Scleroderma, Systemic* / genetics
  • Scleroderma, Systemic* / metabolism
  • Scleroderma, Systemic* / pathology
  • Toll-Like Receptor 7* / genetics
  • Toll-Like Receptor 7* / metabolism
  • Toll-Like Receptor 8* / genetics
  • Toll-Like Receptor 8* / metabolism
  • X Chromosome Inactivation*

Substances

  • Toll-Like Receptor 7
  • Toll-Like Receptor 8
  • TLR7 protein, human
  • TLR8 protein, human
  • RNA, Long Noncoding
  • XIST non-coding RNA
  • Interferon Type I