Structural multiplicity in a solvated hydrate of the anti-retroviral protease inhibitor Lopinavir

Acta Crystallogr E Crystallogr Commun. 2024 Oct 24;80(Pt 11):1206-1209. doi: 10.1107/S2056989024004158. eCollection 2024 Oct 1.

Abstract

Lopinavir is a potent protease inhibitor that is used as a first-line pharmaceutical drug for the treatment of HIV. The multi-component solvated Lopinavir crystal, systematic name (2S)-N-[(2S,4S,5S)-5-[2-(2,6-di-methyl-phen-oxy)acetamido]-4-hy-droxy-1,6-di-phenyl-hexan-2-yl]-3-methyl-2-(2-oxo-1,3-diazinan-1-yl)butanamide-ethane-1,2-diol-water (8/3/7) 8C37H48N4O5·3C2H6O2·7H2O, was prepared using evaporative methods. The crystalline material obtained from this experimental synthesis was characterized and elucidated by single-crystal X-ray diffraction (SC-XRD). The crystal structure is unusual in that the unit cell contains 18 mol-ecules. The stoichiometric ratio of this crystal is eight Lopinavir mol-ecules [8(C37H48N4O5)], three ethane-1,2-diol mol-ecules [3(C2H6O2)] and seven water mol-ecules [7(H2O)]. The crystal packing features both bi- and trifurcated hydrogen bonds between atoms.

Keywords: crystal structure; ethyl­ene glycol; heterosolvate; hydrate; lopinavir; protease inhibitors; solvate.

Grants and funding

This work was supported by the National Research Foundation (NRF) "Competitive Support for Unrated Researchers" grant No. CSUR23042597072 (Dr M. G. Smith), the University of South Africa and the University of the Witwatersrand.