E4F1 coordinates pyruvate metabolism and the activity of the elongator complex to ensure translation fidelity during brain development

Nat Commun. 2025 Jan 2;16(1):67. doi: 10.1038/s41467-024-55444-y.

Abstract

Pyruvate metabolism defects lead to severe neuropathies such as the Leigh syndrome (LS) but the molecular mechanisms underlying neuronal cell death remain poorly understood. Here, we unravel a connection between pyruvate metabolism and the regulation of the epitranscriptome that plays an essential role during brain development. Using genetically engineered mouse model and primary neuronal cells, we identify the transcription factor E4F1 as a key coordinator of AcetylCoenzyme A (AcCoA) production by the pyruvate dehydrogenase complex (PDC) and its utilization as an essential co-factor by the Elongator complex to acetylate tRNAs at the wobble position uridine 34 (U34). E4F1-mediated direct transcriptional regulation of Dlat and Elp3, two genes encoding key subunits of the PDC and of the Elongator complex, respectively, ensures proper translation fidelity and cell survival in the central nervous system (CNS) during mouse embryonic development. Furthermore, analysis of PDH-deficient cells highlight a crosstalk linking the PDC to ELP3 expression that is perturbed in LS patients.

MeSH terms

  • Animals
  • Basic-Leucine Zipper Transcription Factors / genetics
  • Basic-Leucine Zipper Transcription Factors / metabolism
  • Brain* / embryology
  • Brain* / growth & development
  • Brain* / metabolism
  • Dihydrolipoyllysine-Residue Acetyltransferase / genetics
  • Dihydrolipoyllysine-Residue Acetyltransferase / metabolism
  • Female
  • Gene Expression Regulation, Developmental
  • Histone Acetyltransferases
  • Humans
  • Leigh Disease / genetics
  • Leigh Disease / metabolism
  • Mice
  • Mice, Inbred C57BL
  • Mice, Knockout
  • Nerve Tissue Proteins
  • Neurons / metabolism
  • Protein Biosynthesis
  • Pyruvate Dehydrogenase Complex / genetics
  • Pyruvate Dehydrogenase Complex / metabolism
  • Pyruvic Acid* / metabolism
  • RNA, Transfer / genetics
  • RNA, Transfer / metabolism
  • Uridine / metabolism

Substances

  • Pyruvic Acid
  • Pyruvate Dehydrogenase Complex
  • RNA, Transfer
  • Dihydrolipoyllysine-Residue Acetyltransferase
  • Basic-Leucine Zipper Transcription Factors
  • Uridine
  • ELP3 protein, human
  • Nerve Tissue Proteins
  • Histone Acetyltransferases