HLA-E: Immune Receptor Functional Mechanisms Revealed by Structural Studies

Immunol Rev. 2025 Jan;329(1):e13434. doi: 10.1111/imr.13434.

Abstract

HLA-E is a nonclassical, nonpolymorphic, class Ib HLA molecule. Its primary function is to present a conserved nonamer peptide, termed VL9, derived from the signal sequence of classical MHC molecules to the NKG2x-CD94 receptors on NK cells and a subset of T lymphocytes. These receptors regulate the function of NK cells, and the importance of this role, which is conserved across mammalian species, probably accounts for the lack of genetic polymorphism. A second minor function is to present other, weaker binding, pathogen-derived peptides to T lymphocytes. Most of these peptides bind suboptimally to HLA-E, but this binding appears to be enabled by the relative stability of peptide-free, but receptive, HLA-E-β2m complexes. This, in turn, may favor nonclassical antigen processing that may be associated with bacteria infected cells. This review explores how the structure of HLA-E, bound to different peptides and then to NKG2-CD94 or T-cell receptors, relates to HLA-E cell biology and immunology. A detailed understanding of this molecule could open up opportunities for development of universal T-cell and NK-cell-based immunotherapies.

Keywords: CD8 T cells; HLA‐E; MHC class I; MHC‐E; NKG2A; T‐cell receptors.

Publication types

  • Review

MeSH terms

  • Animals
  • Antigen Presentation*
  • HLA-E Antigens*
  • Histocompatibility Antigens Class I* / chemistry
  • Histocompatibility Antigens Class I* / immunology
  • Histocompatibility Antigens Class I* / metabolism
  • Humans
  • Killer Cells, Natural* / immunology
  • Killer Cells, Natural* / metabolism
  • NK Cell Lectin-Like Receptor Subfamily C / metabolism
  • NK Cell Lectin-Like Receptor Subfamily D / chemistry
  • NK Cell Lectin-Like Receptor Subfamily D / immunology
  • NK Cell Lectin-Like Receptor Subfamily D / metabolism
  • Peptides / chemistry
  • Peptides / immunology
  • Peptides / metabolism
  • Protein Binding*
  • Protein Conformation
  • Receptors, Antigen, T-Cell / chemistry
  • Receptors, Antigen, T-Cell / immunology
  • Receptors, Antigen, T-Cell / metabolism
  • Receptors, Immunologic / chemistry
  • Receptors, Immunologic / metabolism
  • Structure-Activity Relationship
  • T-Lymphocytes / immunology
  • T-Lymphocytes / metabolism

Substances

  • Histocompatibility Antigens Class I
  • HLA-E Antigens
  • Receptors, Immunologic
  • NK Cell Lectin-Like Receptor Subfamily C
  • Peptides
  • NK Cell Lectin-Like Receptor Subfamily D
  • Receptors, Antigen, T-Cell