Improved free energies for G.C base-pairs

J Mol Biol. 1985 Oct 5;185(3):645-7. doi: 10.1016/0022-2836(85)90077-4.

Abstract

Thermodynamic parameters of helix formation are reported for seven oligoribonucleotides containing only G.C pairs. These data are used with the nearest-neighbor model to calculate enthalpies and free energies of base-pair formation for G.C pairs. For helix initiation, the free energy change at 37 degrees C, delta G(0)37, is +3.9 kcal/mol; for helix propagation, the delta G(0)37 values are -2.3, -3.2 and -3.3 kcal/mol for C-G, G-G and G-C neighbors, respectively.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Base Composition
  • Cytosine
  • Guanine
  • Nucleic Acid Conformation
  • Oligoribonucleotides*
  • Thermodynamics

Substances

  • Oligoribonucleotides
  • Guanine
  • Cytosine