Crystallographic studies on apocarboxypeptidase A and the complex with glycyl-L-tyrosine

Proc Natl Acad Sci U S A. 1983 Dec;80(23):7151-4. doi: 10.1073/pnas.80.23.7151.

Abstract

The crystal structures of zinc-free carboxypeptidase A (apocarboxypeptidase A) and the complex of glycyl-L-tyrosine with apocarboxypeptidase A are described and compared to the corresponding structures of the zinc-containing enzyme. Only small conformational changes in the zinc ligands accompany removal of the metal. Interactions between the tyrosine residue of glycyl-L-tyrosine and apocarboxypeptidase A are similar to those observed in the complex with the holoenzyme. However, in the absence of zinc, the carbonyl oxygen of the glycyl moiety now receives a hydrogen bond from the side chain of arginine-127. Although not as yet observed, a similar shift of the carbonyl oxygen of a susceptible bond from the zinc to arginine-127 could stabilize tetrahedral intermediates generated during the hydrolysis of substrates by carboxypeptidase.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Apoenzymes / metabolism*
  • Apoproteins / metabolism*
  • Arginine
  • Carboxypeptidases / metabolism*
  • Carboxypeptidases A
  • Dipeptides / metabolism*
  • Models, Molecular
  • Protein Binding
  • Protein Conformation
  • X-Ray Diffraction

Substances

  • Apoenzymes
  • Apoproteins
  • Dipeptides
  • Arginine
  • glycyltyrosine
  • Carboxypeptidases
  • Carboxypeptidases A