Influenza C virus hemagglutinin: comparison with influenza A and B virus hemagglutinins

J Virol. 1984 Apr;50(1):118-24. doi: 10.1128/JVI.50.1.118-124.1984.

Abstract

The complete nucleotide sequence of the influenza C/California/78 virus RNA 4 was obtained by using cloned cDNA derived from the RNA segment. This gene is 2,071 nucleotides long and can code for a polypeptide of 654 amino acids. Although there are no convincing sequence homologies between RNA 4 and the hemagglutinin genes of influenza A and B viruses, we suggest, on the basis of structural features, that RNA 4 of the influenza C virus codes for the hemagglutinin. The structural features which are common to the hemagglutinins of influenza A, B, and C viruses include (i) a hydrophobic signal peptide, (ii) an arginine cleavage site between the hemagglutinin 1 and 2 subunits, (iii) hydrophobic regions at the amino and carboxyl termini of the hemagglutinin 2 subunit, and (iv) several conserved cysteine residues. Additional evidence that RNA 4 of influenza C virus codes for the hemagglutinin is that the tripeptide Ile-Phe-Gly, known to be present at the amino terminus of the hemagglutinin 2 subunit of influenza C virus, is encoded by RNA 4 at a point immediately adjacent to the presumptive arginine cleavage site. The lack of primary sequence homology between the influenza C virus hemagglutinin and the influenza A or B virus hemagglutinins, which all have similar functions, might be attributed to convergent rather than divergent evolution. However, the structural similarities among the influenza A, B, and C virus hemagglutinins strongly suggest that the three hemagglutinin genes have diverged from a common precursor.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • Binding Sites
  • Biological Evolution
  • Cysteine / analysis
  • Genes, Viral*
  • Hemagglutinins, Viral / analysis
  • Hemagglutinins, Viral / genetics*
  • Influenza A virus / genetics
  • Influenza A virus / immunology*
  • Orthomyxoviridae / genetics
  • Orthomyxoviridae / immunology*
  • Peptides / analysis
  • Protein Sorting Signals
  • RNA, Viral / genetics*
  • Sialic Acids / metabolism

Substances

  • Hemagglutinins, Viral
  • Peptides
  • Protein Sorting Signals
  • RNA, Viral
  • Sialic Acids
  • Cysteine

Associated data

  • GENBANK/K01689