Deficiency of 1-methylguanosine in tRNA from Salmonella typhimurium induces frameshifting by quadruplet translocation

J Mol Biol. 1993 Aug 5;232(3):756-65. doi: 10.1006/jmbi.1993.1429.

Abstract

The trmD gene encodes the tRNA(m1G37)methyltransferase, which methylates guanosine (G) to 1-methylguanosine (m1G) at position 37 of tRNAs that read CUN (leucine), CCN (proline), and CGG (arginine) codons. A mutant, trmD3, has previously been isolated, which at high temperature lacks m1G in tRNA, and this deficiency was correlated with a +1 frameshifting activity. In this study, the mechanism of this trmD3-induced frameshift involving mutant tRNA(Pro) and tRNA(Leu) species has been investigated. Potential frameshifting sites for proline tRNAs, CCC-N, were efficiently suppressed in the mutant strain. Hybrid beta-galactosidases encoded by plasmid constructs containing the sites CCC-U and CCC-A were subjected to amino-terminal sequencing. The protein sequences demonstrated that a quadruplet translocation had occurred and that a proline was inserted at these sites, suggesting that a tRNA(Pro) deficient in m1G is the frameshifting agent. Therefore, a mechanism involving a quadruplet codon-anticodon interaction is favoured for trmD3-dependent +1 frameshifting. Of the four potential sites for tRNA(Leu) (CCU-N), two, CCU-U and CCU-C, were significantly suppressed in the trmD3 mutant. Thus, species of tRNA(Leu) may also act as +1 frameshift suppressors. No -1 frameshifting activity was found with the trmD3 mutant.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • Frameshift Mutation / genetics*
  • Guanosine / analogs & derivatives
  • Guanosine / deficiency
  • Molecular Sequence Data
  • RNA, Bacterial / genetics*
  • RNA, Transfer / genetics*
  • RNA, Transfer, Leu / genetics
  • RNA, Transfer, Pro / genetics
  • Salmonella typhimurium / genetics*
  • Suppression, Genetic / genetics*
  • beta-Galactosidase / genetics
  • beta-Lactamases / genetics

Substances

  • RNA, Bacterial
  • RNA, Transfer, Leu
  • RNA, Transfer, Pro
  • Guanosine
  • 1-methylguanosine
  • RNA, Transfer
  • beta-Galactosidase
  • beta-Lactamases