Serotyping HIV type 1 by antibody binding to the V3 loop: relationship to viral genotype. WHO Network for HIV Isolation and Characterization

AIDS Res Hum Retroviruses. 1994 Nov;10(11):1379-86. doi: 10.1089/aid.1994.10.1379.

Abstract

We have investigated whether peptides representing the HIV-1 principal neutralization domain (V3) can be used as antigens in antibody-binding assays to predict the genotypes of the subjects' virus. Serum samples collected from HIV-1-infected subjects from the four WHO-sponsored vaccine evaluation sites (Uganda, Rwanda, Thailand, and Brazil) were characterized by antibody binding to a panel of synthetic V3 peptides that were derived from the consensus sequences of the V3 region of the HIV-1 subgroups according to the env phylogenetic analysis (A-E). An indirect V3 peptide-binding assay was used for primary screening, and a V3 peptide antigen-limiting ELISA was then used as a secondary assay to discriminate cross-reactivity if the screening assay was equivocal. In general, V3 peptide serology could predict HIV-1 genotypes. In sera for which the genotype of the virus was known, peptide assays could predict the correct genotype in approximately 90% of cases for genotypes A, B, C, and E; Ugandan sera of genotype D were more broadly reactive. There was considerable serological cross-reactivity between some HIV-1 genotypes, in particular between A and C, and, to a lesser extent, B and D subtypes. Owing to polymorphism at the crown of the V3 loop, an additional B peptide (B') was required to type Brazilian B genotype sera. These simple assays may help facilitate the determination and distribution of HIV-1 genotypes circulating in populations.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • AIDS Vaccines / pharmacology
  • Amino Acid Sequence
  • Animals
  • Antigenic Variation
  • Brazil / epidemiology
  • Cross Reactions
  • Enzyme-Linked Immunosorbent Assay
  • Genotype
  • HIV Antibodies
  • HIV Antigens / genetics
  • HIV Envelope Protein gp120 / genetics
  • HIV Envelope Protein gp120 / immunology*
  • HIV Infections / epidemiology
  • HIV Infections / virology
  • HIV-1 / classification*
  • HIV-1 / genetics
  • HIV-1 / immunology
  • Humans
  • Molecular Sequence Data
  • Peptide Fragments / genetics
  • Peptide Fragments / immunology*
  • Rabbits
  • Rwanda / epidemiology
  • Serotyping / methods*
  • Thailand / epidemiology
  • Uganda / epidemiology
  • World Health Organization

Substances

  • AIDS Vaccines
  • HIV Antibodies
  • HIV Antigens
  • HIV Envelope Protein gp120
  • HIV envelope protein gp120 (305-321)
  • Peptide Fragments