Genomic organization and promoter sequence of a gene encoding a rat liver-specific type-I transport protein

Gene. 1995 Mar 10;154(2):243-7. doi: 10.1016/0378-1119(94)00824-c.

Abstract

We report the isolation and characterization of a rat gene (designated TI-LTP) encoding a liver-specific cell-surface glycoprotein that belongs to the type-I transporter family. This gene, including 5' and 3' flanking domains, was cloned from a rat lambda DASH genomic library and its nucleotide sequence was determined. TI-LTP is a single-copy gene which spans over 6 kb, and contains nine introns ranging in size from 90 bp to over 1.8 kb. Two transcription start points were located using a nuclease S-1 protection assay. The TI-LTP promoter (pTI-LTP) lacks a canonical TATA-box element, but does contain five TAGA elements. Several putative transcription-factor-binding sites were identified in the pTI-LTP, including activator protein 2 (AP-2) sites and a peroxisome proliferator response element (PPRE).

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Binding Sites
  • Biological Transport
  • Blotting, Southern
  • Carrier Proteins / genetics*
  • Cloning, Molecular
  • DNA-Binding Proteins / metabolism
  • Exons
  • Gene Expression Regulation
  • Introns
  • Liver / chemistry*
  • Liver / metabolism
  • Membrane Glycoproteins / genetics
  • Molecular Sequence Data
  • Operator Regions, Genetic
  • Organ Specificity
  • Promoter Regions, Genetic
  • Rats
  • Receptors, Cytoplasmic and Nuclear / metabolism
  • Restriction Mapping
  • Sequence Analysis, DNA
  • Transcription Factor AP-2
  • Transcription Factors / metabolism

Substances

  • Carrier Proteins
  • DNA-Binding Proteins
  • Membrane Glycoproteins
  • Receptors, Cytoplasmic and Nuclear
  • Transcription Factor AP-2
  • Transcription Factors

Associated data

  • GENBANK/L30107