Common topology within a non-collagenous domain of several different collagen types

Matrix Biol. 1994 Apr;14(3):233-9. doi: 10.1016/0945-053x(94)90187-2.

Abstract

The secondary structure of a conserved non-collagenous module in alpha 1(V), alpha 1(XI), alpha 1(IX), alpha 1(XII), alpha 1(XIV) and alpha 1(XVI) collagen chains and in proline- and arginine-rich protein was analyzed using different algorithms. The results predict that a common anti-parallel beta-sheet structure composed of nine consensus beta-strands is present in these non-collagenous modules. A model for the packing of these beta-sheets is proposed which suggests that the predicted beta-sheet structure may be involved in molecular recognition functions.

Publication types

  • Comparative Study

MeSH terms

  • Algorithms
  • Amino Acid Sequence
  • Animals
  • Collagen / chemistry*
  • Collagen / genetics
  • Consensus Sequence
  • Crystallography, X-Ray
  • Humans
  • Models, Molecular
  • Molecular Sequence Data
  • Molecular Structure
  • Protein Folding
  • Protein Structure, Secondary
  • Sequence Homology, Amino Acid

Substances

  • Collagen