Cloning and sequencing the genes encoding goldfish and carp ependymin

Gene. 1994 Apr 20;141(2):237-41. doi: 10.1016/0378-1119(94)90578-9.

Abstract

Ependymins (EPNs) are brain glycoproteins thought to function in optic nerve regeneration and long-term memory consolidation. To date, epn genes have been characterized in two orders of teleost fish. In this study, polymerase chain reactions (PCR) were used to amplify the complete 1.6-kb epn genes, gf-I and cc-I, from genomic DNA of Cypriniformes, goldfish and carp, respectively. Amplified bands were cloned and sequenced. Each gene consists of six exons and five introns. The exon portion of gf-I encodes a predicted 215-amino-acid (aa) protein previously characterized as GF-I, while cc-I encodes a predicted 215-aa protein 95% homologous to GF-I.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Carps / genetics*
  • Cloning, Molecular
  • Goldfish / genetics*
  • Molecular Sequence Data
  • Nerve Tissue Proteins / genetics*
  • Sequence Alignment

Substances

  • Nerve Tissue Proteins
  • ependymins

Associated data

  • GENBANK/U00432
  • GENBANK/U00433