Conformational studies of a two-module fragment of nebulin and implications for actin association

Arch Biochem Biophys. 1994 May 1;310(2):310-7. doi: 10.1006/abbi.1994.1172.

Abstract

Nebulin, a family of giant myofibrillar proteins of 700-900 kDa, has been proposed as a length-regulating template for the thin filaments of skeletal muscle. In the present study, the conformational states of a two-module nebulin fragment (ND8) were investigated by circular dichroism, steady-state fluorescence, fluorescence lifetime, and one-dimensional and two-dimensional NMR techniques. We observed the following: (a) Contrary to the predicted high alpha-helical content by computer analysis, CD spectra of ND8 indicated only a maximum of 10% alpha-helix and 25% beta-sheet in a variety of buffers; (b) The presence of increasing concentrations of trifluoroethanol (TFE) promoted the formation of alpha-helix and ND8 contained 50% alpha-helix at 67% TFE; (c) Measurement of fluorescence lifetime, anisotropy, and CD of tyrosines in ND8 in various concentrations of TFE indicates that tyrosines are incorporated into the newly formed helical segments; (d) Preliminary correlation spectroscopy and nuclear Overhauser enhancement spectroscopy NMR spectra of ND8 confirmed the formation of alpha-helical structure and identified sites of helical segments in 30% TFE around the highly conserved tyrosine residues. These data suggest that the conformation of nebulin and its mode of interaction with actin are distinct from the helical tropomyosin.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Actins / chemistry
  • Actins / metabolism*
  • Amino Acid Sequence
  • Circular Dichroism
  • Fluorescence Polarization
  • Humans
  • Magnetic Resonance Spectroscopy
  • Molecular Sequence Data
  • Muscle Proteins / chemistry*
  • Muscle Proteins / metabolism*
  • Peptide Fragments / chemistry
  • Peptide Fragments / isolation & purification
  • Protein Binding
  • Protein Conformation*
  • Protein Structure, Secondary*
  • Spectrometry, Fluorescence

Substances

  • Actins
  • Muscle Proteins
  • Peptide Fragments
  • nebulin