A method for accurate amplification of polymorphic CA-repeat sequences

PCR Methods Appl. 1993 Aug;3(1):7-12. doi: 10.1101/gr.3.1.7.

Abstract

Anomalous PCR products are often produced during the amplification of d(CA)n.d(TG)n sequences. Upon denaturing polyacrylamide gel electrophoresis, these products yield a ladder-like pattern that can complicate genotypic interpretation. We have developed two related techniques, referred to as two- and three-stage linear amplification (2-SLA and 3-SLA, respectively), which largely overcome this problem and yield readily interpretable banding patterns.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Adenine
  • Alleles
  • Base Sequence
  • Cytosine
  • DNA / analysis*
  • DNA Primers
  • Electrophoresis, Polyacrylamide Gel / methods
  • Female
  • Genetic Markers
  • Genotype
  • Humans
  • Male
  • Molecular Sequence Data
  • Pedigree
  • Polymerase Chain Reaction / methods*
  • Polymorphism, Genetic*
  • Repetitive Sequences, Nucleic Acid*

Substances

  • DNA Primers
  • Genetic Markers
  • Cytosine
  • DNA
  • Adenine