Analysis of 5' flanking sequences from the Schizosaccharomyces pombe cdc2 gene

Gene. 1993 May 15;127(1):145-8. doi: 10.1016/0378-1119(93)90630-l.

Abstract

Previously, the sequence of the Schizosaccaromyces pombe cdc2 gene was reported to begin at a HindIII site, 141 nucleotides (nt) upstream from the ATG start codon [Hindley and Phear, Gene 31 (1984) 129-134]. We have extended the sequence of the 5' untranslated region of the gene to a PsI site at -822 nt. We demonstrate by primer extension analysis that transcription of the gene initiates at one major point 180 nt upstream from the ATG start codon. Since the 822-nt fragment extending from the PstI site to the start codon has been used in many studies as the promoter for cdc2 [Booher and Beach, Mol. Cell. Biol. 6 (1986) 3523-3530; Carr et al., Mol. Gen. Genet 218 (1989) 41-49; Gould and Nurse, Nature 342 (1989) 39-45], we investigated the strength of this promoter element relative to the SV40 early promoter, a promoter known to work very well in S. pombe [Jones et al., Cell 53 (1988) 659-667]. We confirm that the cdc2 gene fragment has significant promoting activity, albeit 20- to 60-fold less than the SV40 early promoter, when assayed in S. pombe.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • CDC2 Protein Kinase / genetics*
  • DNA, Fungal
  • Molecular Sequence Data
  • Promoter Regions, Genetic
  • Schizosaccharomyces / enzymology
  • Schizosaccharomyces / genetics*
  • Transcription, Genetic

Substances

  • DNA, Fungal
  • CDC2 Protein Kinase

Associated data

  • GENBANK/D12906
  • GENBANK/D12907
  • GENBANK/L02522
  • GENBANK/L03653
  • GENBANK/L03654
  • GENBANK/L07304
  • GENBANK/L07631
  • GENBANK/L07632
  • GENBANK/X54209
  • GENBANK/X73149