A functional peptide encoded in the Escherichia coli 23S rRNA

Proc Natl Acad Sci U S A. 1996 May 28;93(11):5641-6. doi: 10.1073/pnas.93.11.5641.

Abstract

A pentapeptide open reading frame equipped with a canonical ribosome-binding site is present in the Escherichia coli 23S rRNA. Overexpression of 23S rRNA fragments containing the mini-gene renders cells resistant to the ribosome-inhibiting antibiotic erythromycin. Mutations that change either the initiator or stop codons of the peptide mini-gene result in the loss of erythromycin resistance. Nonsense mutations in the mini-gene also abolish erythromycin resistance, which can be restored in the presence of the suppressor tRNA, thus proving that expression of the rRNA-encoded peptide is essential for the resistance phenotype. The ribosome appears to be the likely target of action of the rRNA-encoded pentapeptide, because in vitro translation of the peptide mini-gene decreases the inhibitory action of erythromycin on cell-free protein synthesis. Thus, the new mechanism of drug resistance reveals that in addition to the structural and functional role of rRNA in the ribosome, it may also have a peptide-coding function.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Ampicillin Resistance
  • Base Sequence
  • Binding Sites
  • DNA Primers
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / metabolism
  • Drug Resistance, Microbial
  • Erythromycin / pharmacology
  • Escherichia coli / drug effects
  • Escherichia coli / genetics
  • Escherichia coli / metabolism*
  • Genes, Suppressor
  • Molecular Sequence Data
  • Nucleic Acid Conformation
  • Open Reading Frames
  • Polymerase Chain Reaction
  • Protein Biosynthesis*
  • RNA, Ribosomal, 23S / metabolism*
  • Ribosomes / metabolism
  • Sequence Deletion

Substances

  • DNA Primers
  • DNA, Ribosomal
  • RNA, Ribosomal, 23S
  • Erythromycin