Chromosomal localization and expressed sequence tag generation of clones from a normalized human adult thymus cDNA library

Genome Res. 1995 Nov;5(4):359-67. doi: 10.1101/gr.5.4.359.

Abstract

Expressed sequence tags (ESTs) from 298 clones have been generated from a randomly primed, normalized human adult thymus cDNA library. We describe the chromosomal localization of 136 of these ESTs by PCR-based mapping to a human monochromosomal somatic cell hybrid panel. Data base similarities to known genes are also described. A subset (n = 18) of these randomly primed ESTs extended the sequence of ESTs from other tissues currently in dbEST. Of the nonrepetitive human adult thymus ESTs generated in this study, 237 (79.5%) have no similarity to current data base entries. This would suggest that our collection contains approximately 100 new coding regions from thymus tissue, a large proportion of which likely will represent the middle regions of genes. The mapped ESTs should prove useful as new gene-based markers for mapping and candidate gene hunting, particularly when anchored to a well-developed physical map of the human genome.

MeSH terms

  • Chromosome Mapping*
  • Cloning, Molecular
  • DNA, Complementary / genetics*
  • Databases, Factual
  • Gene Expression
  • Gene Library*
  • Genetic Markers*
  • Genome, Human
  • Humans
  • Hybrid Cells
  • Molecular Sequence Data
  • Sequence Analysis
  • Thymus Gland / chemistry*

Substances

  • DNA, Complementary
  • Genetic Markers

Associated data

  • GENBANK/L44288
  • GENBANK/L44292
  • GENBANK/L44294
  • GENBANK/L44296
  • GENBANK/L44303
  • GENBANK/L44311
  • GENBANK/L44312
  • GENBANK/L44313
  • GENBANK/L44315
  • GENBANK/L44319
  • GENBANK/L44325
  • GENBANK/L44327
  • GENBANK/L44337
  • GENBANK/L44346
  • GENBANK/L44354
  • GENBANK/L44369
  • GENBANK/L44373
  • GENBANK/L44374
  • GENBANK/L44380
  • GENBANK/L44381
  • GENBANK/L44387
  • GENBANK/L44395
  • GENBANK/L44396
  • GENBANK/L44408
  • GENBANK/L44411
  • GENBANK/L44422
  • GENBANK/L44501
  • GENBANK/L44547
  • GENBANK/L44571
  • GENBANK/L44576