A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 12.7-28.0 min region on the linkage map

DNA Res. 1996 Jun 30;3(3):137-55. doi: 10.1093/dnares/3.3.137.

Abstract

The 718,122 base pair sequence of the Escherichia coli K-12 genome corresponding to the region from 12.7 to 28.0 minutes on the genetic map is described. This region contains at least 681 potential open reading frames, of which 277 (41%) have been previously identified, 147 (22%) are homologous to other known genes, 139 (20%) are identical or similar to the hypothetical genes registered in databases, and the remaining 118 (17%) do not show a significant similarity to any other gene. In this region, we assigned a cluster of cit genes encoding multienzyme citrate lyase, two clusters of fimbrial genes and a set of lysogenic phage genes encoding integrase, excisionase and repressor in the e14 genetic element. In addition, a new valine tRNA gene, designated valZ, and a family of long directly repeated sequences, LDR-A, -B and -C, were found.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • DNA, Bacterial*
  • Escherichia coli / genetics*
  • Genetic Linkage*
  • Genome, Bacterial*
  • Molecular Sequence Data
  • Open Reading Frames

Substances

  • DNA, Bacterial

Associated data

  • GENBANK/D90699
  • GENBANK/D90700
  • GENBANK/D90701
  • GENBANK/D90702
  • GENBANK/D90703
  • GENBANK/D90704
  • GENBANK/D90705
  • GENBANK/D90706
  • GENBANK/D90707
  • GENBANK/D90708
  • GENBANK/D90709
  • GENBANK/D90710
  • GENBANK/D90711
  • GENBANK/D90713
  • GENBANK/D90714
  • GENBANK/D90715
  • GENBANK/D90716
  • GENBANK/D90717
  • GENBANK/D90718
  • GENBANK/D90719
  • GENBANK/D90720
  • GENBANK/D90721
  • GENBANK/D90722
  • GENBANK/D90723
  • GENBANK/D90724
  • GENBANK/D90725
  • GENBANK/D90726
  • GENBANK/D90727
  • GENBANK/D90728
  • GENBANK/D90729