Analysis of the ribosome large subunit assembly and 23 S rRNA stability in vivo

J Mol Biol. 1996 Nov 1;263(3):396-410. doi: 10.1006/jmbi.1996.0584.

Abstract

The ability of mutant 23 S ribosomal RNA to form particles with proteins of the large ribosomal subunit in vivo was studied. A series of overlapping deletions covering the entire 23 S rRNA, were constructed in the plasmid copy of an E. coli 23 S rRNA gene. The mutant genes were expressed in vivo using an inducible tac promoter. Mutant species of 23 S rRNA, containing deletions between positions 40 and 2773, were incorporated into stable ribonucleoprotein particles. In contrast, if one end of the 23 S rRNA was deleted, the mutant rRNA was unstable and did not form ribosomal particles. Protein composition of the mutant particles was specific; the presence of the primary rRNA-binding proteins corresponded to their known binding sites. Furthermore, several previously unknown ribosomal protein binding sites in 23 S rRNA were identified. Implications of the results on ribosome assembly are discussed.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Binding Sites
  • Escherichia coli / genetics
  • RNA, Ribosomal, 16S / biosynthesis
  • RNA, Ribosomal, 16S / genetics
  • RNA, Ribosomal, 23S / biosynthesis
  • RNA, Ribosomal, 23S / chemistry
  • RNA, Ribosomal, 23S / genetics
  • RNA, Ribosomal, 23S / metabolism*
  • Ribosomal Proteins / analysis
  • Ribosomal Proteins / metabolism*
  • Ribosomes / chemistry*
  • Sequence Deletion

Substances

  • RNA, Ribosomal, 16S
  • RNA, Ribosomal, 23S
  • Ribosomal Proteins