Functional characterization of pediocin PA-1 binding to liposomes in the absence of a protein receptor and its relationship to a predicted tertiary structure

Appl Environ Microbiol. 1997 Feb;63(2):524-31. doi: 10.1128/aem.63.2.524-531.1997.

Abstract

The physicochemical interaction of pediocin PA-1 with target membranes was characterized using lipid vesicles made from the total lipids extracted from Listeria monocytogenes. Pediocin PA-1 caused the time- and concentration-dependent release of entrapped carboxyfluorescein (CF) from the vesicles. The pediocin-induced CF efflux rates were higher under acidic conditions than under neutral and alkaline conditions and were dependent on both pediocin and lipid concentrations. A binding isotherm constructed on the basis of the Langmuir isotherm gave an apparent binding constant of 1.4 x 10(7) M-1 at pH 6.0. The imposition of a transmembrane potential (inside negative) increased the CF efflux rate by 88%. Pediocin PA-1 also permeablized synthetic vesicles composed only of phosphatidylcholine. Sequence alignments and secondary-structure predictions for the N terminus of pediocin PA-1 and other class IIa bacteriocins predicted that pediocin PA-1 contained two beta-sheets maintained in a hairpin conformation stabilized by a disulfide bridge. The structural model also revealed patches of positively charged residues, consistent with the argument that electrostatic interactions play an important role in the binding of pediocin PA-1 to the lipid vesicles. This study demonstrates that pediocin PA-1 can function in the absence of a protein receptor and provides a structural model consistent with these results.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Bacteriocins / chemistry*
  • Bacteriocins / metabolism*
  • Biological Transport
  • Computer Simulation
  • Fluoresceins / metabolism
  • Hydrogen-Ion Concentration
  • Liposomes / metabolism*
  • Membrane Potentials
  • Models, Molecular
  • Molecular Sequence Data
  • Pediocins
  • Permeability
  • Protein Binding
  • Protein Structure, Tertiary*
  • Sequence Homology, Amino Acid

Substances

  • Bacteriocins
  • Fluoresceins
  • Liposomes
  • Pediocins
  • pediocin PA-1
  • 6-carboxyfluorescein

Associated data

  • SWISSPROT/P29430
  • SWISSPROT/P34034
  • SWISSPROT/P35618
  • SWISSPROT/P38577
  • SWISSPROT/P38579
  • SWISSPROT/P38580
  • SWISSPROT/P80097
  • SWISSPROT/P80493
  • SWISSPROT/P80569