HIV type 1 subtype C in Addis Ababa, Ethiopia

AIDS Res Hum Retroviruses. 1997 Aug 10;13(12):1071-5. doi: 10.1089/aid.1997.13.1071.

Abstract

PIP: HIV-1 variants in different geographic regions have been phylogenetically classified into the genetic subtypes A-I and O on the basis of sequence differences in the V3 regions of their gp120 envelope genes. The existence of all HIV-1 subtypes except subtype I has been confirmed in Africa. This paper describes the distribution of HIV-1 subtypes in Ethiopia. The first Ethiopian AIDS case was reported in 1986 and the AIDS epidemic has now become a rapidly growing problem in Addis Ababa, the capital city. HIV-1 seroprevalence in the city is estimated to be 10-27% among pregnant women, 47-59% among prostitutes, and 7% among blood donors. Preliminary sequence data on a limited number of samples indicated the presence of subtype C in Addis Ababa in 1988. 94 sera collected from prostitutes, pregnant women, and blood donors during 1989-95 were analyzed to assess the distribution of HIV-1 subtypes in Addis Ababa. HIV-1 subtype C was identified in 93 of 94 cases. One case of subtype A virus was identified. Subtype C was also highly abundant also before the 1995 sera collection. Finally, the authors discuss how the Ethiopian subtype C sequences differ slightly from the consensus C sequence.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Ethiopia / epidemiology
  • Female
  • HIV Infections / blood
  • HIV Infections / epidemiology
  • HIV Infections / virology*
  • HIV-1 / classification*
  • HIV-1 / genetics
  • HIV-1 / isolation & purification
  • Humans
  • Molecular Sequence Data
  • Phylogeny
  • Pregnancy
  • RNA, Viral
  • Sequence Homology, Amino Acid

Substances

  • RNA, Viral

Associated data

  • GENBANK/U88727
  • GENBANK/U88728
  • GENBANK/U88729
  • GENBANK/U88730
  • GENBANK/U88731
  • GENBANK/U88732
  • GENBANK/U88733
  • GENBANK/U88734
  • GENBANK/U88735
  • GENBANK/U88736
  • GENBANK/U88737
  • GENBANK/U88738
  • GENBANK/U88739
  • GENBANK/U88740
  • GENBANK/U88741
  • GENBANK/U88742
  • GENBANK/U88743
  • GENBANK/U88744
  • GENBANK/U88745
  • GENBANK/U88746
  • GENBANK/U88747
  • GENBANK/U88748
  • GENBANK/U88749
  • GENBANK/U88750
  • GENBANK/U88751
  • GENBANK/U88752
  • GENBANK/U88753
  • GENBANK/U88754
  • GENBANK/U88755
  • GENBANK/U88756