A DNA-binding element for a steroid receptor-binding factor is flanked by dual nuclear matrix DNA attachment sites in the c-myc gene promoter

J Biol Chem. 1997 Sep 26;272(39):24657-65. doi: 10.1074/jbc.272.39.24657.

Abstract

The receptor-binding factor (RBF) for the avian oviduct progesterone (Pg) receptor (PR) has previously been shown to be a unique 10-kDa nuclear matrix protein that generates high affinity PR-binding sites on avian DNA. This paper describes the use of Southwestern blot and DNA gel shift analyses with RBF protein to identify a minimal 54-base pair RBF-binding element in the matrix-associated region (MAR) of the Pg-regulated c-myc gene promoter. This element contains a 5'-GC-rich domain and a 3'-AT-rich domain, the latter of which has a homopurine/homopyrimidine structure. The gel shift assays required the generation of an RBF-maltose fusion protein (RBF-MBP), which specifically binds this element and is supershifted when the anti-RBF polyclonal antibody is added. Computer analysis of the full-length amino acid sequence for RBF predicts a DNA-binding motif involving a beta-sheet structure at the N-terminal domain. Southern blot analyses using nuclear matrix DNA suggests that there are dual MAR sites in the c-myc promoter, which flank an intervening domain containing the RBF element. The co-transfection of this MAR sequence, containing the RBF element and cloned into a luciferase reporter vector, together with an RBF expression vector construct, into steroid treated human MCF-7 cells, results in a decrease of the c-myc promoter activity relative to control transfections containing only the parent vector of the RBF expression construct. These data suggest that a unique chromatin/nuclear matrix structure, composed of the RBF-DNA element complex which is flanked by nuclear matrix attachment sites, serves to bind the PR and repress the c-myc promoter.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Animals
  • Avian Proteins*
  • Base Sequence
  • Binding Sites
  • Carrier Proteins / metabolism*
  • Chickens
  • DNA
  • DNA-Binding Proteins / metabolism*
  • Female
  • Genes, myc*
  • Humans
  • Molecular Sequence Data
  • Nuclear Matrix / metabolism*
  • Nuclear Proteins / metabolism*
  • Promoter Regions, Genetic*
  • Receptors, Progesterone / metabolism*
  • Transfection
  • Tumor Cells, Cultured

Substances

  • Avian Proteins
  • Carrier Proteins
  • DNA-Binding Proteins
  • Nuclear Proteins
  • RBF-1 protein, Gallus gallus
  • Receptors, Progesterone
  • DNA