High resolution methylation analysis of the galectin-1 gene promoter region in expressing and nonexpressing tissues

FEBS Lett. 1998 Jan 9;421(2):152-8. doi: 10.1016/s0014-5793(97)01553-6.

Abstract

We conducted by bisulfite genomic sequencing a high resolution study of the methylation of the galectin-1 gene in expressing and nonexpressing tissues. We show that: (i) hypomethylation of galectin-1 promoter correlates with expression; (ii) differences in methylation occur in a small region, which include a CpG cluster; (iii) the density of methyl-CpGs rather than site-specific methylation distinguishes the nonexpressing from the expressing alleles; (iv) the modification profiles in nonexpressing tissues are highly heterogeneous; (v) a single CpG within 1300 bp is always methylated both in expressing and nonexpressing tissues; (vi) these features are conserved in rat and mouse.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 3T3 Cells
  • Animals
  • Base Sequence
  • Cell Extracts
  • CpG Islands
  • DNA Methylation*
  • DNA, Complementary
  • DNA-Binding Proteins / metabolism
  • Galectin 1
  • Hemagglutinins / genetics*
  • Mice
  • Mice, Inbred C57BL
  • Molecular Sequence Data
  • Nuclear Proteins / metabolism
  • Promoter Regions, Genetic*
  • Rats
  • Rats, Sprague-Dawley

Substances

  • Cell Extracts
  • DNA, Complementary
  • DNA-Binding Proteins
  • Galectin 1
  • Hemagglutinins
  • Nuclear Proteins