The stability of mRNA from the gsiB gene of Bacillus subtilis is dependent on the presence of a strong ribosome binding site

Mol Gen Genet. 1998 Jun;258(5):538-45. doi: 10.1007/s004380050765.

Abstract

In Bacillus subtilis IS58 starved of glucose or exposed to heat shock, ethanol or salt stress, the sigmaB-dependent general stress protein GsiB is accumulated to a higher level than other general stress proteins. This high-level accumulation of GsiB can at least partially be attributed to the remarkably long half-life (approximately 20 min) of the gsiB mRNA. Analysis of different gsiB-lacZ fusions revealed that this stability is not determined by sequences at the 3' end of the transcript but rather by sequences upstream of the translational start codon. Site-directed mutagenesis established that a strong ribosome binding site was crucial for the increased stability of the gsiB mRNA. A comparison of the sequences upstream of the translational start codons of three general stress genes, gsiB, gspA and ctc, revealed a direct correlation between mRNA stability and the strength of their translational signals.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacillus subtilis / genetics*
  • Bacterial Proteins / genetics*
  • Base Sequence
  • Binding Sites
  • Chloramphenicol / pharmacology
  • Heat-Shock Proteins / genetics
  • Molecular Sequence Data
  • Protein Synthesis Inhibitors / pharmacology
  • Puromycin / pharmacology
  • RNA
  • RNA, Bacterial / metabolism*
  • RNA, Messenger / metabolism*
  • Ribosomes / metabolism*
  • Rifampin / pharmacology

Substances

  • Bacterial Proteins
  • Heat-Shock Proteins
  • Protein Synthesis Inhibitors
  • RNA, Bacterial
  • RNA, Messenger
  • RNA, recombinant
  • global stress protein A, bacteria
  • protein CTC, Bacteria
  • gsiB protein, Bacillus subtilis
  • Puromycin
  • RNA
  • Chloramphenicol
  • Rifampin