RNA aptamers that specifically bind to the Ras-binding domain of Raf-1

FEBS Lett. 1998 Dec 18;441(2):322-6. doi: 10.1016/s0014-5793(98)01572-5.

Abstract

RNA aptamers that bind to the Ras-binding domain (RBD) of a proto-oncogene product, Raf-1, were isolated from a pool of random sequences using a glutathione S-transferase-fused RBD (GST-RBD). The RNA molecules bind to the GST-RBD, but not to GST, with dissociation constants of about 300 nM. In contrast, these RNA aptamers do not bind to the Ras-binding domain of the RGL protein, which is also known to be activated by Ras. The aptamers actually compete with Ras for binding to the Raf-1 RBD. The anti-Raf-1 aptamers may be used to specifically inhibit the Ras-Raf interaction in the complicated signaling network in mammalian cells.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • Biopolymers / chemistry
  • Biopolymers / genetics
  • Biopolymers / metabolism*
  • Cloning, Molecular
  • Molecular Sequence Data
  • Nucleic Acid Conformation
  • Protein Binding
  • Proto-Oncogene Proteins c-raf / chemistry
  • Proto-Oncogene Proteins c-raf / metabolism*
  • RNA / chemistry
  • RNA / genetics
  • RNA / metabolism*
  • Sequence Homology, Nucleic Acid
  • ras Proteins / metabolism*

Substances

  • Biopolymers
  • RNA
  • Proto-Oncogene Proteins c-raf
  • ras Proteins