SPEM: a parser for EMBL style flat file database entries

M R Pocock; T Hubbard; E Birney

doi:10.1093/bioinformatics/14.9.823

SPEM: a parser for EMBL style flat file database entries

Bioinformatics. 1998;14(9):823-4. doi: 10.1093/bioinformatics/14.9.823.

Authors

M R Pocock¹, T Hubbard, E Birney

Affiliation

¹ Informatics, The Sanger Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK. [email protected]

PMID: 9918956
DOI: 10.1093/bioinformatics/14.9.823

Abstract

Summary: We present a set of Perl modules for the flexible and robust parsing and editing of EMBL/SWISS-PROT databases.

Availability: The Web page at http://www.sanger.ac. uk/Software/PerlModule/ provides information about downloading the SPEM and PrEMBL modules, and provides links to documentation and example code.

Publication types

Review

MeSH terms

Databases, Factual / trends*
Electronic Data Processing / trends*
Internet
Molecular Sequence Data
Online Systems*
Software