Ritchie M - Search Results

1

In vivo development of Theileria annulata: major changes in efferent lymph following infection with sporozoites or allogeneic schizont-infected mononuclear cells.

Nichani AK, Thorp BH, Brown CG, Campbell JD, Brown DJ, Ritchie M, Spooner RL. Nichani AK, et al. Among authors: ritchie m. Parasitology. 1999 Apr;118 ( Pt 4):327-33. doi: 10.1017/s0031182098003904. Parasitology. 1999. PMID: 10340321

2

Swift: primary data analysis for the Illumina Solexa sequencing platform.

Whiteford N, Skelly T, Curtis C, Ritchie ME, Löhr A, Zaranek AW, Abnizova I, Brown C. Whiteford N, et al. Bioinformatics. 2009 Sep 1;25(17):2194-9. doi: 10.1093/bioinformatics/btp383. Epub 2009 Jun 23. Bioinformatics. 2009. PMID: 19549630 Free PMC article.

3

beadarray: R classes and methods for Illumina bead-based data.

Dunning MJ, Smith ML, Ritchie ME, Tavaré S. Dunning MJ, et al. Bioinformatics. 2007 Aug 15;23(16):2183-4. doi: 10.1093/bioinformatics/btm311. Epub 2007 Jun 22. Bioinformatics. 2007. PMID: 17586828

4

R/Bioconductor software for Illumina's Infinium whole-genome genotyping BeadChips.

Ritchie ME, Carvalho BS, Hetrick KN, Tavaré S, Irizarry RA. Ritchie ME, et al. Bioinformatics. 2009 Oct 1;25(19):2621-3. doi: 10.1093/bioinformatics/btp470. Epub 2009 Aug 6. Bioinformatics. 2009. PMID: 19661241 Free PMC article.

5

BASH: a tool for managing BeadArray spatial artefacts.

Cairns JM, Dunning MJ, Ritchie ME, Russell R, Lynch AG. Cairns JM, et al. Among authors: ritchie me. Bioinformatics. 2008 Dec 15;24(24):2921-2. doi: 10.1093/bioinformatics/btn557. Epub 2008 Oct 25. Bioinformatics. 2008. PMID: 18953044 Free PMC article.

6

Statistical issues in the analysis of Illumina data.

Dunning MJ, Barbosa-Morais NL, Lynch AG, Tavaré S, Ritchie ME. Dunning MJ, et al. BMC Bioinformatics. 2008 Feb 6;9:85. doi: 10.1186/1471-2105-9-85. BMC Bioinformatics. 2008. PMID: 18254947 Free PMC article.

7

High-throughput analysis of candidate imprinted genes and allele-specific gene expression in the human term placenta.

Daelemans C, Ritchie ME, Smits G, Abu-Amero S, Sudbery IM, Forrest MS, Campino S, Clark TG, Stanier P, Kwiatkowski D, Deloukas P, Dermitzakis ET, Tavaré S, Moore GE, Dunham I. Daelemans C, et al. Among authors: ritchie me. BMC Genet. 2010 Apr 19;11:25. doi: 10.1186/1471-2156-11-25. BMC Genet. 2010. PMID: 20403199 Free PMC article.

8

Allele-specific expression analysis methods for high-density SNP microarray data.

Liu R, Maia AT, Russell R, Caldas C, Ponder BA, Ritchie ME. Liu R, et al. Bioinformatics. 2012 Apr 15;28(8):1102-8. doi: 10.1093/bioinformatics/bts089. Epub 2012 Feb 21. Bioinformatics. 2012. PMID: 22355082

9

CellBench: R/Bioconductor software for comparing single-cell RNA-seq analysis methods.

Su S, Tian L, Dong X, Hickey PF, Freytag S, Ritchie ME. Su S, et al. Bioinformatics. 2020 Apr 1;36(7):2288-2290. doi: 10.1093/bioinformatics/btz889. Bioinformatics. 2020. PMID: 31778143 Free PMC article.

10

Combining multiple tools outperforms individual methods in gene set enrichment analyses.

Alhamdoosh M, Ng M, Wilson NJ, Sheridan JM, Huynh H, Wilson MJ, Ritchie ME. Alhamdoosh M, et al. Among authors: ritchie me. Bioinformatics. 2017 Feb 1;33(3):414-424. doi: 10.1093/bioinformatics/btw623. Bioinformatics. 2017. PMID: 27694195 Free PMC article.

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