Kawabata T - Search Results

1

Solution structure of the fibronectin type III domain from Bacillus circulans WL-12 chitinase A1.

Jee JG, Ikegami T, Hashimoto M, Kawabata T, Ikeguchi M, Watanabe T, Shirakawa M. Jee JG, et al. Among authors: kawabata t. J Biol Chem. 2002 Jan 11;277(2):1388-97. doi: 10.1074/jbc.M109726200. Epub 2001 Oct 12. J Biol Chem. 2002. PMID: 11600504 Free article.

2

Double-stranded DNA binding, an unusual property of DNA polymerase epsilon, promotes epigenetic silencing in Saccharomyces cerevisiae.

Tsubota T, Tajima R, Ode K, Kubota H, Fukuhara N, Kawabata T, Maki S, Maki H. Tsubota T, et al. Among authors: kawabata t. J Biol Chem. 2006 Oct 27;281(43):32898-908. doi: 10.1074/jbc.M606637200. Epub 2006 Aug 16. J Biol Chem. 2006. PMID: 16916794 Free article.

3

Novel types of two-domain multi-copper oxidases: possible missing links in the evolution.

Nakamura K, Kawabata T, Yura K, Go N. Nakamura K, et al. Among authors: kawabata t. FEBS Lett. 2003 Oct 23;553(3):239-44. doi: 10.1016/s0014-5793(03)01000-7. FEBS Lett. 2003. PMID: 14572631 Free article.

4

Finding evolutionary relations beyond superfamilies: fold-based superfamilies.

Matsuda K, Nishioka T, Kinoshita K, Kawabata T, Go N. Matsuda K, et al. Among authors: kawabata t. Protein Sci. 2003 Oct;12(10):2239-51. doi: 10.1110/ps.0383603. Protein Sci. 2003. PMID: 14500881 Free PMC article.

5

Filtering remote homologues using predicted structural information.

Uehara K, Kawabata T, Go N. Uehara K, et al. Among authors: kawabata t. Protein Eng Des Sel. 2004 Jul;17(7):565-70. doi: 10.1093/protein/gzh065. Epub 2004 Aug 19. Protein Eng Des Sel. 2004. PMID: 15319470

6

MATRAS: A program for protein 3D structure comparison.

Kawabata T. Kawabata T. Nucleic Acids Res. 2003 Jul 1;31(13):3367-9. doi: 10.1093/nar/gkg581. Nucleic Acids Res. 2003. PMID: 12824329 Free PMC article.

7

The first crystal structure of an archaeal helical repeat protein.

Yoneda K, Sakuraba H, Tsuge H, Katunuma N, Kuramitsu S, Kawabata T, Ohshima T. Yoneda K, et al. Among authors: kawabata t. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 Jul 1;61(Pt 7):636-9. doi: 10.1107/S1744309105019263. Epub 2005 Jun 30. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005. PMID: 16511116 Free PMC article.

8

Improvement of protein secondary structure prediction using binary word encoding.

Kawabata T, Doi J. Kawabata T, et al. Proteins. 1997 Jan;27(1):36-46. doi: 10.1002/(sici)1097-0134(199701)27:1<36::aid-prot5>3.0.co;2-l. Proteins. 1997. PMID: 9037710

9

Detection of multiscale pockets on protein surfaces using mathematical morphology.

Kawabata T. Kawabata T. Proteins. 2010 Apr;78(5):1195-211. doi: 10.1002/prot.22639. Proteins. 2010. PMID: 19938154

10

Electrostatic potential of nucleotide-free protein is sufficient for discrimination between adenine and guanine-specific binding sites.

Basu G, Sivanesan D, Kawabata T, Go N. Basu G, et al. Among authors: kawabata t. J Mol Biol. 2004 Sep 17;342(3):1053-66. doi: 10.1016/j.jmb.2004.07.047. J Mol Biol. 2004. PMID: 15342256

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