Mallick P - Search Results

1

GXXXG and AXXXA: common alpha-helical interaction motifs in proteins, particularly in extremophiles.

Kleiger G, Grothe R, Mallick P, Eisenberg D. Kleiger G, et al. Among authors: mallick p. Biochemistry. 2002 May 14;41(19):5990-7. doi: 10.1021/bi0200763. Biochemistry. 2002. PMID: 11993993

2

PFIT and PFRIT: bioinformatic algorithms for detecting glycosidase function from structure and sequence.

Kleiger G, Panina EM, Mallick P, Eisenberg D. Kleiger G, et al. Among authors: mallick p. Protein Sci. 2004 Jan;13(1):221-9. doi: 10.1110/ps.03274104. Protein Sci. 2004. PMID: 14691237 Free PMC article.

3

The 1.7 A crystal structure of BPI: a study of how two dissimilar amino acid sequences can adopt the same fold.

Kleiger G, Beamer LJ, Grothe R, Mallick P, Eisenberg D. Kleiger G, et al. Among authors: mallick p. J Mol Biol. 2000 Jun 16;299(4):1019-34. doi: 10.1006/jmbi.2000.3805. J Mol Biol. 2000. PMID: 10843855

4

The directional atomic solvation energy: an atom-based potential for the assignment of protein sequences to known folds.

Mallick P, Weiss R, Eisenberg D. Mallick P, et al. Proc Natl Acad Sci U S A. 2002 Dec 10;99(25):16041-6. doi: 10.1073/pnas.252626399. Epub 2002 Dec 2. Proc Natl Acad Sci U S A. 2002. PMID: 12461172 Free PMC article.

5

Genomic evidence that the intracellular proteins of archaeal microbes contain disulfide bonds.

Mallick P, Boutz DR, Eisenberg D, Yeates TO. Mallick P, et al. Proc Natl Acad Sci U S A. 2002 Jul 23;99(15):9679-84. doi: 10.1073/pnas.142310499. Epub 2002 Jul 9. Proc Natl Acad Sci U S A. 2002. PMID: 12107280 Free PMC article.

6

Inference of protein function and protein linkages in Mycobacterium tuberculosis based on prokaryotic genome organization: a combined computational approach.

Strong M, Mallick P, Pellegrini M, Thompson MJ, Eisenberg D. Strong M, et al. Among authors: mallick p. Genome Biol. 2003;4(9):R59. doi: 10.1186/gb-2003-4-9-r59. Epub 2003 Aug 29. Genome Biol. 2003. PMID: 12952538 Free PMC article.

7

Selecting protein targets for structural genomics of Pyrobaculum aerophilum: validating automated fold assignment methods by using binary hypothesis testing.

Mallick P, Goodwill KE, Fitz-Gibbon S, Miller JH, Eisenberg D. Mallick P, et al. Proc Natl Acad Sci U S A. 2000 Mar 14;97(6):2450-5. doi: 10.1073/pnas.050589297. Proc Natl Acad Sci U S A. 2000. PMID: 10706641 Free PMC article.

8

Precursor-ion mass re-estimation improves peptide identification on hybrid instruments.

Luethy R, Kessner DE, Katz JE, Maclean B, Grothe R, Kani K, Faça V, Pitteri S, Hanash S, Agus DB, Mallick P. Luethy R, et al. Among authors: mallick p. J Proteome Res. 2008 Sep;7(9):4031-9. doi: 10.1021/pr800307m. Epub 2008 Aug 16. J Proteome Res. 2008. PMID: 18707148 Free PMC article.

9

A modeled hydrophobic domain on the TCL1 oncoprotein mediates association with AKT at the cytoplasmic membrane.

French SW, Shen RR, Koh PJ, Malone CS, Mallick P, Teitell MA. French SW, et al. Among authors: mallick p. Biochemistry. 2002 May 21;41(20):6376-82. doi: 10.1021/bi016068o. Biochemistry. 2002. PMID: 12009899

10

A fully human scFv phage display library for rapid antibody fragment reformatting.

Li K, Zettlitz KA, Lipianskaya J, Zhou Y, Marks JD, Mallick P, Reiter RE, Wu AM. Li K, et al. Among authors: mallick p. Protein Eng Des Sel. 2015 Oct;28(10):307-16. doi: 10.1093/protein/gzv024. Epub 2015 May 19. Protein Eng Des Sel. 2015. PMID: 25991864 Free PMC article.

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