Nadra AD - Search Results

1

High-risk (HPV16) human papillomavirus E7 oncoprotein is highly stable and extended, with conformational transitions that could explain its multiple cellular binding partners.

Alonso LG, García-Alai MM, Nadra AD, Lapeña AN, Almeida FL, Gualfetti P, Prat-Gay GD. Alonso LG, et al. Among authors: nadra ad. Biochemistry. 2002 Aug 20;41(33):10510-8. doi: 10.1021/bi025579n. Biochemistry. 2002. PMID: 12173938

2

Distinctive cognate sequence discrimination, bound DNA conformation, and binding modes in the E2 C-terminal domains from prototype human and bovine papillomaviruses.

Ferreiro DU, Lima LM, Nadra AD, Alonso LG, Goldbaum FA, de Prat-Gay G. Ferreiro DU, et al. Among authors: nadra ad. Biochemistry. 2000 Nov 28;39(47):14692-701. doi: 10.1021/bi001694r. Biochemistry. 2000. PMID: 11087426

3

The folding mechanism of a dimeric beta-barrel domain.

de Prat-Gay G, Nadra AD, Corrales-Izquierdo FJ, Alonso LG, Ferreiro DU, Mok YK. de Prat-Gay G, et al. Among authors: nadra ad. J Mol Biol. 2005 Aug 19;351(3):672-82. doi: 10.1016/j.jmb.2005.05.070. J Mol Biol. 2005. PMID: 16023675

4

Structural and thermodynamic basis for the enhanced transcriptional control by the human papillomavirus strain-16 E2 protein.

Cicero DO, Nadra AD, Eliseo T, Dellarole M, Paci M, de Prat-Gay G. Cicero DO, et al. Among authors: nadra ad. Biochemistry. 2006 May 30;45(21):6551-60. doi: 10.1021/bi060123h. Biochemistry. 2006. PMID: 16716065

5

A strained DNA binding helix is conserved for site recognition, folding nucleation, and conformational modulation.

Wetzler DE, Gallo M, Melis R, Eliseo T, Nadra AD, Ferreiro DU, Paci M, Sánchez IE, Cicero DO, de Prat Gay G. Wetzler DE, et al. Among authors: nadra ad. Biopolymers. 2009 Jun;91(6):432-43. doi: 10.1002/bip.21146. Biopolymers. 2009. PMID: 19156829

6

Free energy contributions to direct readout of a DNA sequence.

Ferreiro DU, Dellarole M, Nadra AD, de Prat-Gay G. Ferreiro DU, et al. Among authors: nadra ad. J Biol Chem. 2005 Sep 16;280(37):32480-4. doi: 10.1074/jbc.M505706200. Epub 2005 Jul 5. J Biol Chem. 2005. PMID: 16000299 Free article.

7

Frataxin Structure and Function.

Castro IH, Pignataro MF, Sewell KE, Espeche LD, Herrera MG, Noguera ME, Dain L, Nadra AD, Aran M, Smal C, Gallo M, Santos J. Castro IH, et al. Among authors: nadra ad. Subcell Biochem. 2019;93:393-438. doi: 10.1007/978-3-030-28151-9_13. Subcell Biochem. 2019. PMID: 31939159 Review.

8

DNA-binding specificity prediction with FoldX.

Nadra AD, Serrano L, Alibés A. Nadra AD, et al. Methods Enzymol. 2011;498:3-18. doi: 10.1016/B978-0-12-385120-8.00001-2. Methods Enzymol. 2011. PMID: 21601671

9

Molecular basis of thermal stability in truncated (2/2) hemoglobins.

Bustamante JP, Bonamore A, Nadra AD, Sciamanna N, Boffi A, Estrin DA, Boechi L. Bustamante JP, et al. Among authors: nadra ad. Biochim Biophys Acta. 2014 Jul;1840(7):2281-8. doi: 10.1016/j.bbagen.2014.03.018. Epub 2014 Apr 2. Biochim Biophys Acta. 2014. PMID: 24704259

10

Modeling heme proteins using atomistic simulations.

Bikiel DE, Boechi L, Capece L, Crespo A, De Biase PM, Di Lella S, González Lebrero MC, Martí MA, Nadra AD, Perissinotti LL, Scherlis DA, Estrin DA. Bikiel DE, et al. Among authors: nadra ad. Phys Chem Chem Phys. 2006 Dec 28;8(48):5611-28. doi: 10.1039/b611741b. Epub 2006 Oct 11. Phys Chem Chem Phys. 2006. PMID: 17149482 Review.

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