Vendruscolo M - Search Results

1

Small-world view of the amino acids that play a key role in protein folding.

Vendruscolo M, Dokholyan NV, Paci E, Karplus M. Vendruscolo M, et al. Phys Rev E Stat Nonlin Soft Matter Phys. 2002 Jun;65(6 Pt 1):061910. doi: 10.1103/PhysRevE.65.061910. Epub 2002 Jun 25. Phys Rev E Stat Nonlin Soft Matter Phys. 2002. PMID: 12188762

2

Three key residues form a critical contact network in a protein folding transition state.

Vendruscolo M, Paci E, Dobson CM, Karplus M. Vendruscolo M, et al. Nature. 2001 Feb 1;409(6820):641-5. doi: 10.1038/35054591. Nature. 2001. PMID: 11214326

3

Native and non-native interactions along protein folding and unfolding pathways.

Paci E, Vendruscolo M, Karplus M. Paci E, et al. Among authors: vendruscolo m. Proteins. 2002 May 15;47(3):379-92. doi: 10.1002/prot.10089. Proteins. 2002. PMID: 11948791

4

Determination of a transition state at atomic resolution from protein engineering data.

Paci E, Vendruscolo M, Dobson CM, Karplus M. Paci E, et al. Among authors: vendruscolo m. J Mol Biol. 2002 Nov 15;324(1):151-63. doi: 10.1016/s0022-2836(02)00944-0. J Mol Biol. 2002. PMID: 12421565

5

Validity of Gō models: comparison with a solvent-shielded empirical energy decomposition.

Paci E, Vendruscolo M, Karplus M. Paci E, et al. Among authors: vendruscolo m. Biophys J. 2002 Dec;83(6):3032-8. doi: 10.1016/S0006-3495(02)75308-3. Biophys J. 2002. PMID: 12496075 Free PMC article.

6

Self-consistent determination of the transition state for protein folding: application to a fibronectin type III domain.

Paci E, Clarke J, Steward A, Vendruscolo M, Karplus M. Paci E, et al. Among authors: vendruscolo m. Proc Natl Acad Sci U S A. 2003 Jan 21;100(2):394-9. doi: 10.1073/pnas.232704999. Epub 2003 Jan 6. Proc Natl Acad Sci U S A. 2003. PMID: 12515856 Free PMC article.

7

Protein folding: bringing theory and experiment closer together.

Vendruscolo M, Paci E. Vendruscolo M, et al. Curr Opin Struct Biol. 2003 Feb;13(1):82-7. doi: 10.1016/s0959-440x(03)00007-1. Curr Opin Struct Biol. 2003. PMID: 12581664 Review.

8

Analysis of the distributed computing approach applied to the folding of a small beta peptide.

Paci E, Cavalli A, Vendruscolo M, Caflisch A. Paci E, et al. Among authors: vendruscolo m. Proc Natl Acad Sci U S A. 2003 Jul 8;100(14):8217-22. doi: 10.1073/pnas.1331838100. Epub 2003 Jun 18. Proc Natl Acad Sci U S A. 2003. PMID: 12815104 Free PMC article.

9

Calculation of mutational free energy changes in transition states for protein folding.

Lindorff-Larsen K, Paci E, Serrano L, Dobson CM, Vendruscolo M. Lindorff-Larsen K, et al. Among authors: vendruscolo m. Biophys J. 2003 Aug;85(2):1207-14. doi: 10.1016/S0006-3495(03)74556-1. Biophys J. 2003. PMID: 12885664 Free PMC article.

10

Structures and relative free energies of partially folded states of proteins.

Vendruscolo M, Paci E, Karplus M, Dobson CM. Vendruscolo M, et al. Proc Natl Acad Sci U S A. 2003 Dec 9;100(25):14817-21. doi: 10.1073/pnas.2036516100. Epub 2003 Dec 1. Proc Natl Acad Sci U S A. 2003. PMID: 14657374 Free PMC article.

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