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Page 1
The InterPro Database, 2003 brings increased coverage and new features.
Mulder NJ, Apweiler R, Attwood TK, Bairoch A, Barrell D, Bateman A, Binns D, Biswas M, Bradley P, Bork P, Bucher P, Copley RR, Courcelle E, Das U, Durbin R, Falquet L, Fleischmann W, Griffiths-Jones S, Haft D, Harte N, Hulo N, Kahn D, Kanapin A, Krestyaninova M, Lopez R, Letunic I, Lonsdale D, Silventoinen V, Orchard SE, Pagni M, Peyruc D, Ponting CP, Selengut JD, Servant F, Sigrist CJ, Vaughan R, Zdobnov EM. Mulder NJ, et al. Among authors: silventoinen v. Nucleic Acids Res. 2003 Jan 1;31(1):315-8. doi: 10.1093/nar/gkg046. Nucleic Acids Res. 2003. PMID: 12520011 Free PMC article.
InterProScan: protein domains identifier.
Quevillon E, Silventoinen V, Pillai S, Harte N, Mulder N, Apweiler R, Lopez R. Quevillon E, et al. Among authors: silventoinen v. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W116-20. doi: 10.1093/nar/gki442. Nucleic Acids Res. 2005. PMID: 15980438 Free PMC article.
WU-Blast2 server at the European Bioinformatics Institute.
Lopez R, Silventoinen V, Robinson S, Kibria A, Gish W. Lopez R, et al. Among authors: silventoinen v. Nucleic Acids Res. 2003 Jul 1;31(13):3795-8. doi: 10.1093/nar/gkg573. Nucleic Acids Res. 2003. PMID: 12824421 Free PMC article.
InterPro, progress and status in 2005.
Mulder NJ, Apweiler R, Attwood TK, Bairoch A, Bateman A, Binns D, Bradley P, Bork P, Bucher P, Cerutti L, Copley R, Courcelle E, Das U, Durbin R, Fleischmann W, Gough J, Haft D, Harte N, Hulo N, Kahn D, Kanapin A, Krestyaninova M, Lonsdale D, Lopez R, Letunic I, Madera M, Maslen J, McDowall J, Mitchell A, Nikolskaya AN, Orchard S, Pagni M, Ponting CP, Quevillon E, Selengut J, Sigrist CJ, Silventoinen V, Studholme DJ, Vaughan R, Wu CH. Mulder NJ, et al. Among authors: silventoinen v. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D201-5. doi: 10.1093/nar/gki106. Nucleic Acids Res. 2005. PMID: 15608177 Free PMC article.
The EMBL Nucleotide Sequence Database.
Kanz C, Aldebert P, Althorpe N, Baker W, Baldwin A, Bates K, Browne P, van den Broek A, Castro M, Cochrane G, Duggan K, Eberhardt R, Faruque N, Gamble J, Diez FG, Harte N, Kulikova T, Lin Q, Lombard V, Lopez R, Mancuso R, McHale M, Nardone F, Silventoinen V, Sobhany S, Stoehr P, Tuli MA, Tzouvara K, Vaughan R, Wu D, Zhu W, Apweiler R. Kanz C, et al. Among authors: silventoinen v. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D29-33. doi: 10.1093/nar/gki098. Nucleic Acids Res. 2005. PMID: 15608199 Free PMC article.
The EMBL Nucleotide Sequence Database.
Kulikova T, Aldebert P, Althorpe N, Baker W, Bates K, Browne P, van den Broek A, Cochrane G, Duggan K, Eberhardt R, Faruque N, Garcia-Pastor M, Harte N, Kanz C, Leinonen R, Lin Q, Lombard V, Lopez R, Mancuso R, McHale M, Nardone F, Silventoinen V, Stoehr P, Stoesser G, Tuli MA, Tzouvara K, Vaughan R, Wu D, Zhu W, Apweiler R. Kulikova T, et al. Among authors: silventoinen v. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D27-30. doi: 10.1093/nar/gkh120. Nucleic Acids Res. 2004. PMID: 14681351 Free PMC article.
Public web-based services from the European Bioinformatics Institute.
Harte N, Silventoinen V, Quevillon E, Robinson S, Kallio K, Fustero X, Patel P, Jokinen P, Lopez R; European Bioinformatics Institute. Harte N, et al. Among authors: silventoinen v. Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W3-9. doi: 10.1093/nar/gkh405. Nucleic Acids Res. 2004. PMID: 15215339 Free PMC article.
The European Bioinformatics Institute web site: a new view.
Lopez R, Robinson S, Kibria A, Harte N, Patel G, Harper R, Quevillon E, Silventoinen V, Kallio K, Jokinen P. Lopez R, et al. Among authors: silventoinen v. Bioinformatics. 2003 Mar 1;19(4):546-7. doi: 10.1093/bioinformatics/btg022. Bioinformatics. 2003. PMID: 12611814
SOAP-based services provided by the European Bioinformatics Institute.
Pillai S, Silventoinen V, Kallio K, Senger M, Sobhany S, Tate J, Velankar S, Golovin A, Henrick K, Rice P, Stoehr P, Lopez R. Pillai S, et al. Among authors: silventoinen v. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W25-8. doi: 10.1093/nar/gki491. Nucleic Acids Res. 2005. PMID: 15980463 Free PMC article.