Warnow T - Search Results

1

Towards the development of computational tools for evaluating phylogenetic network reconstruction methods.

Nakhleh L, Sun J, Warnow T, Linder CR, Moret BM, Tholse A. Nakhleh L, et al. Among authors: warnow t. Pac Symp Biocomput. 2003:315-26. Pac Symp Biocomput. 2003. PMID: 12603038 Free article.

2

HMMerge: an ensemble method for multiple sequence alignment.

Park M, Warnow T. Park M, et al. Among authors: warnow t. Bioinform Adv. 2023 Apr 17;3(1):vbad052. doi: 10.1093/bioadv/vbad052. eCollection 2023. Bioinform Adv. 2023. PMID: 37128578 Free PMC article.

3

QR-STAR: A Polynomial-Time Statistically Consistent Method for Rooting Species Trees Under the Coalescent.

Tabatabaee Y, Roch S, Warnow T. Tabatabaee Y, et al. Among authors: warnow t. J Comput Biol. 2023 Nov;30(11):1146-1181. doi: 10.1089/cmb.2023.0185. Epub 2023 Oct 30. J Comput Biol. 2023. PMID: 37902986

4

WITCH-NG: efficient and accurate alignment of datasets with sequence length heterogeneity.

Liu B, Warnow T. Liu B, et al. Among authors: warnow t. Bioinform Adv. 2023 Mar 6;3(1):vbad024. doi: 10.1093/bioadv/vbad024. eCollection 2023. Bioinform Adv. 2023. PMID: 36970502 Free PMC article.

5

Weighted ASTRID: fast and accurate species trees from weighted internode distances.

Liu B, Warnow T. Liu B, et al. Among authors: warnow t. Algorithms Mol Biol. 2023 Jul 19;18(1):6. doi: 10.1186/s13015-023-00230-6. Algorithms Mol Biol. 2023. PMID: 37468904 Free PMC article.

6

DISCO+QR: rooting species trees in the presence of GDL and ILS.

Willson J, Tabatabaee Y, Liu B, Warnow T. Willson J, et al. Among authors: warnow t. Bioinform Adv. 2023 Feb 7;3(1):vbad015. doi: 10.1093/bioadv/vbad015. eCollection 2023. Bioinform Adv. 2023. PMID: 36789293 Free PMC article.

7

A new fast heuristic for computing the breakpoint phylogeny and experimental phylogenetic analyses of real and synthetic data.

Cosner ME, Jansen RK, Moret BM, Raubeson LA, Wang LS, Warnow T, Wyman S. Cosner ME, et al. Among authors: warnow t. Proc Int Conf Intell Syst Mol Biol. 2000;8:104-15. Proc Int Conf Intell Syst Mol Biol. 2000. PMID: 10977071

8

A new implementation and detailed study of breakpoint analysis.

Moret BM, Wyman S, Bader DA, Warnow T, Yan M. Moret BM, et al. Among authors: warnow t. Pac Symp Biocomput. 2001:583-94. doi: 10.1142/9789814447362_0056. Pac Symp Biocomput. 2001. PMID: 11262975 Free article.

9

New approaches for reconstructing phylogenies from gene order data.

Moret BM, Wang LS, Warnow T, Wyman SK. Moret BM, et al. Among authors: warnow t. Bioinformatics. 2001;17 Suppl 1:S165-73. doi: 10.1093/bioinformatics/17.suppl_1.s165. Bioinformatics. 2001. PMID: 11473006

10

Designing fast converging phylogenetic methods.

Nakhleh L, Roshan U, St John K, Sun J, Warnow T. Nakhleh L, et al. Among authors: warnow t. Bioinformatics. 2001;17 Suppl 1:S190-8. doi: 10.1093/bioinformatics/17.suppl_1.s190. Bioinformatics. 2001. PMID: 11473009

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