Feig M - Search Results

1

Performance comparison of generalized born and Poisson methods in the calculation of electrostatic solvation energies for protein structures.

Feig M, Onufriev A, Lee MS, Im W, Case DA, Brooks CL 3rd. Feig M, et al. J Comput Chem. 2004 Jan 30;25(2):265-84. doi: 10.1002/jcc.10378. J Comput Chem. 2004. PMID: 14648625

2

Accurate reconstruction of all-atom protein representations from side-chain-based low-resolution models.

Feig M, Rotkiewicz P, Kolinski A, Skolnick J, Brooks CL 3rd. Feig M, et al. Proteins. 2000 Oct 1;41(1):86-97. doi: 10.1002/1097-0134(20001001)41:1<86::aid-prot110>3.0.co;2-y. Proteins. 2000. PMID: 10944396

3

Evolution and physics in comparative protein structure modeling.

Fiser A, Feig M, Brooks CL 3rd, Sali A. Fiser A, et al. Among authors: feig m. Acc Chem Res. 2002 Jun;35(6):413-21. doi: 10.1021/ar010061h. Acc Chem Res. 2002. PMID: 12069626 Review.

4

Evaluating CASP4 predictions with physical energy functions.

Feig M, Brooks CL 3rd. Feig M, et al. Proteins. 2002 Nov 1;49(2):232-45. doi: 10.1002/prot.10217. Proteins. 2002. PMID: 12211003

5

New analytic approximation to the standard molecular volume definition and its application to generalized Born calculations.

Lee MS, Feig M, Salsbury FR Jr, Brooks CL 3rd. Lee MS, et al. Among authors: feig m. J Comput Chem. 2003 Aug;24(11):1348-56. doi: 10.1002/jcc.10272. J Comput Chem. 2003. PMID: 12827676

6

An implicit membrane generalized born theory for the study of structure, stability, and interactions of membrane proteins.

Im W, Feig M, Brooks CL 3rd. Im W, et al. Among authors: feig m. Biophys J. 2003 Nov;85(5):2900-18. doi: 10.1016/S0006-3495(03)74712-2. Biophys J. 2003. PMID: 14581194 Free PMC article.

7

Improved treatment of the protein backbone in empirical force fields.

MacKerell AD Jr, Feig M, Brooks CL 3rd. MacKerell AD Jr, et al. Among authors: feig m. J Am Chem Soc. 2004 Jan 28;126(3):698-9. doi: 10.1021/ja036959e. J Am Chem Soc. 2004. PMID: 14733527

8

Recent advances in the development and application of implicit solvent models in biomolecule simulations.

Feig M, Brooks CL 3rd. Feig M, et al. Curr Opin Struct Biol. 2004 Apr;14(2):217-24. doi: 10.1016/j.sbi.2004.03.009. Curr Opin Struct Biol. 2004. PMID: 15093837 Review.

9

MMTSB Tool Set: enhanced sampling and multiscale modeling methods for applications in structural biology.

Feig M, Karanicolas J, Brooks CL 3rd. Feig M, et al. J Mol Graph Model. 2004 May;22(5):377-95. doi: 10.1016/j.jmgm.2003.12.005. J Mol Graph Model. 2004. PMID: 15099834

10

Extending the treatment of backbone energetics in protein force fields: limitations of gas-phase quantum mechanics in reproducing protein conformational distributions in molecular dynamics simulations.

Mackerell AD Jr, Feig M, Brooks CL 3rd. Mackerell AD Jr, et al. Among authors: feig m. J Comput Chem. 2004 Aug;25(11):1400-15. doi: 10.1002/jcc.20065. J Comput Chem. 2004. PMID: 15185334

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