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MIPS: analysis and annotation of proteins from whole genomes.
Mewes HW, Amid C, Arnold R, Frishman D, Güldener U, Mannhaupt G, Münsterkötter M, Pagel P, Strack N, Stümpflen V, Warfsmann J, Ruepp A. Mewes HW, et al. Among authors: ruepp a. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D41-4. doi: 10.1093/nar/gkh092. Nucleic Acids Res. 2004. PMID: 14681354 Free PMC article.
The MIPS mammalian protein-protein interaction database.
Pagel P, Kovac S, Oesterheld M, Brauner B, Dunger-Kaltenbach I, Frishman G, Montrone C, Mark P, Stümpflen V, Mewes HW, Ruepp A, Frishman D. Pagel P, et al. Among authors: ruepp a. Bioinformatics. 2005 Mar;21(6):832-4. doi: 10.1093/bioinformatics/bti115. Epub 2004 Nov 5. Bioinformatics. 2005. PMID: 15531608
MIPS bacterial genomes functional annotation benchmark dataset.
Tetko IV, Brauner B, Dunger-Kaltenbach I, Frishman G, Montrone C, Fobo G, Ruepp A, Antonov AV, Surmeli D, Mewes HW. Tetko IV, et al. Among authors: ruepp a. Bioinformatics. 2005 May 15;21(10):2520-1. doi: 10.1093/bioinformatics/bti380. Epub 2005 Mar 15. Bioinformatics. 2005. PMID: 15769832
Super paramagnetic clustering of protein sequences.
Tetko IV, Facius A, Ruepp A, Mewes HW. Tetko IV, et al. Among authors: ruepp a. BMC Bioinformatics. 2005 Apr 1;6:82. doi: 10.1186/1471-2105-6-82. BMC Bioinformatics. 2005. PMID: 15804359 Free PMC article.
MIPS: analysis and annotation of proteins from whole genomes in 2005.
Mewes HW, Frishman D, Mayer KF, Münsterkötter M, Noubibou O, Pagel P, Rattei T, Oesterheld M, Ruepp A, Stümpflen V. Mewes HW, et al. Among authors: ruepp a. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D169-72. doi: 10.1093/nar/gkj148. Nucleic Acids Res. 2006. PMID: 16381839 Free PMC article.
MPact: the MIPS protein interaction resource on yeast.
Güldener U, Münsterkötter M, Oesterheld M, Pagel P, Ruepp A, Mewes HW, Stümpflen V. Güldener U, et al. Among authors: ruepp a. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D436-41. doi: 10.1093/nar/gkj003. Nucleic Acids Res. 2006. PMID: 16381906 Free PMC article.
Beside the integration of high-throughput data, information about experimental evidence for PPIs in the literature was compiled by experts adding up to 4300 distinct PPIs connecting 1500 proteins in yeast. As the interaction data is a complementary part of CYGD, interactiv …
Beside the integration of high-throughput data, information about experimental evidence for PPIs in the literature was compiled by experts a …
The Mouse Functional Genome Database (MfunGD): functional annotation of proteins in the light of their cellular context.
Ruepp A, Doudieu ON, van den Oever J, Brauner B, Dunger-Kaltenbach I, Fobo G, Frishman G, Montrone C, Skornia C, Wanka S, Rattei T, Pagel P, Riley L, Frishman D, Surmeli D, Tetko IV, Oesterheld M, Stümpflen V, Mewes HW. Ruepp A, et al. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D568-71. doi: 10.1093/nar/gkj074. Nucleic Acids Res. 2006. PMID: 16381934 Free PMC article.
MitoP2: the mitochondrial proteome database--now including mouse data.
Prokisch H, Andreoli C, Ahting U, Heiss K, Ruepp A, Scharfe C, Meitinger T. Prokisch H, et al. Among authors: ruepp a. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D705-11. doi: 10.1093/nar/gkj127. Nucleic Acids Res. 2006. PMID: 16381964 Free PMC article.
64 results