Li Y - Search Results

1

The HUPO PSI's molecular interaction format--a community standard for the representation of protein interaction data.

Hermjakob H, Montecchi-Palazzi L, Bader G, Wojcik J, Salwinski L, Ceol A, Moore S, Orchard S, Sarkans U, von Mering C, Roechert B, Poux S, Jung E, Mersch H, Kersey P, Lappe M, Li Y, Zeng R, Rana D, Nikolski M, Husi H, Brun C, Shanker K, Grant SG, Sander C, Bork P, Zhu W, Pandey A, Brazma A, Jacq B, Vidal M, Sherman D, Legrain P, Cesareni G, Xenarios I, Eisenberg D, Steipe B, Hogue C, Apweiler R. Hermjakob H, et al. Among authors: li y. Nat Biotechnol. 2004 Feb;22(2):177-83. doi: 10.1038/nbt926. Nat Biotechnol. 2004. PMID: 14755292

2

Combining gene expression profiles and protein-protein interaction data to infer gene functions.

Tu K, Yu H, Li YX. Tu K, et al. J Biotechnol. 2006 Jul 25;124(3):475-85. doi: 10.1016/j.jbiotec.2006.01.024. Epub 2006 Mar 13. J Biotechnol. 2006. PMID: 16530869

3

Predicting O-glycosylation sites in mammalian proteins by using SVMs.

Li S, Liu B, Zeng R, Cai Y, Li Y. Li S, et al. Among authors: li y. Comput Biol Chem. 2006 Jun;30(3):203-8. doi: 10.1016/j.compbiolchem.2006.02.002. Comput Biol Chem. 2006. PMID: 16731044

4

Sys-BodyFluid: a systematical database for human body fluid proteome research.

Li SJ, Peng M, Li H, Liu BS, Wang C, Wu JR, Li YX, Zeng R. Li SJ, et al. Nucleic Acids Res. 2009 Jan;37(Database issue):D907-12. doi: 10.1093/nar/gkn849. Epub 2008 Oct 31. Nucleic Acids Res. 2009. PMID: 18978022 Free PMC article.

5

SysPTM: a systematic resource for proteomic research on post-translational modifications.

Li H, Xing X, Ding G, Li Q, Wang C, Xie L, Zeng R, Li Y. Li H, et al. Among authors: li y, li q. Mol Cell Proteomics. 2009 Aug;8(8):1839-49. doi: 10.1074/mcp.M900030-MCP200. Epub 2009 Apr 14. Mol Cell Proteomics. 2009. PMID: 19366988 Free PMC article.

6

A rationally engineered cytosine base editor retains high on-target activity while reducing both DNA and RNA off-target effects.

Zuo E, Sun Y, Yuan T, He B, Zhou C, Ying W, Liu J, Wei W, Zeng R, Li Y, Yang H. Zuo E, et al. Among authors: li y. Nat Methods. 2020 Jun;17(6):600-604. doi: 10.1038/s41592-020-0832-x. Epub 2020 May 18. Nat Methods. 2020. PMID: 32424272

7

Computational methods for protein-protein interaction and their application.

Shi TL, Li YX, Cai YD, Chou KC. Shi TL, et al. Curr Protein Pept Sci. 2005 Oct;6(5):443-9. doi: 10.2174/138920305774329313. Curr Protein Pept Sci. 2005. PMID: 16248796 Review.

8

Comparison of a proteomic approach with a microarray-based approach to detect exons in the mouse genome.

Sheng QH, Wang LS, Dai J, Jiang XS, Li RX, Ma DJ, Li YX, Zeng R, Wu JR. Sheng QH, et al. Nat Genet. 2006 Nov;38(11):1223-4. doi: 10.1038/ng1106-1223. Nat Genet. 2006. PMID: 17072293 No abstract available.

9

MPSQ: a web tool for protein-state searching.

Zheng S, Sheng J, Wang C, Wang X, Yu Y, Li Y, Michie A, Dai J, Zhong Y, Hao P, Liu L, Li Y. Zheng S, et al. Among authors: li y. Bioinformatics. 2008 Oct 15;24(20):2412-3. doi: 10.1093/bioinformatics/btn427. Epub 2008 Aug 12. Bioinformatics. 2008. PMID: 18697766

10

On the estimation of false positives in peptide identifications using decoy search strategy.

Shen C, Sheng Q, Dai J, Li Y, Zeng R, Tang H. Shen C, et al. Among authors: li y. Proteomics. 2009 Jan;9(1):194-204. doi: 10.1002/pmic.200800330. Proteomics. 2009. PMID: 19053142 Free PMC article.

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