Drenkow J - Search Results

1

Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22.

Kampa D, Cheng J, Kapranov P, Yamanaka M, Brubaker S, Cawley S, Drenkow J, Piccolboni A, Bekiranov S, Helt G, Tammana H, Gingeras TR. Kampa D, et al. Among authors: drenkow j. Genome Res. 2004 Mar;14(3):331-42. doi: 10.1101/gr.2094104. Genome Res. 2004. PMID: 14993201 Free PMC article.

2

Simultaneous genotyping and species identification using hybridization pattern recognition analysis of generic Mycobacterium DNA arrays.

Gingeras TR, Ghandour G, Wang E, Berno A, Small PM, Drobniewski F, Alland D, Desmond E, Holodniy M, Drenkow J. Gingeras TR, et al. Among authors: drenkow j. Genome Res. 1998 May;8(5):435-48. doi: 10.1101/gr.8.5.435. Genome Res. 1998. PMID: 9582189 Free article.

3

The transcriptional responses of respiratory epithelial cells to Bordetella pertussis reveal host defensive and pathogen counter-defensive strategies.

Belcher CE, Drenkow J, Kehoe B, Gingeras TR, McNamara N, Lemjabbar H, Basbaum C, Relman DA. Belcher CE, et al. Among authors: drenkow j. Proc Natl Acad Sci U S A. 2000 Dec 5;97(25):13847-52. doi: 10.1073/pnas.230262797. Proc Natl Acad Sci U S A. 2000. PMID: 11087813 Free PMC article.

4

Detection of deleted genomic DNA using a semiautomated computational analysis of GeneChip data.

Salamon H, Kato-Maeda M, Small PM, Drenkow J, Gingeras TR. Salamon H, et al. Among authors: drenkow j. Genome Res. 2000 Dec;10(12):2044-54. doi: 10.1101/gr.gr-1529r. Genome Res. 2000. PMID: 11116098 Free PMC article.

5

Comparing genomes within the species Mycobacterium tuberculosis.

Kato-Maeda M, Rhee JT, Gingeras TR, Salamon H, Drenkow J, Smittipat N, Small PM. Kato-Maeda M, et al. Among authors: drenkow j. Genome Res. 2001 Apr;11(4):547-54. doi: 10.1101/gr.166401. Genome Res. 2001. PMID: 11282970 Free PMC article.

6

Temporal gene regulation during HIV-1 infection of human CD4+ T cells.

Corbeil J, Sheeter D, Genini D, Rought S, Leoni L, Du P, Ferguson M, Masys DR, Welsh JB, Fink JL, Sasik R, Huang D, Drenkow J, Richman DD, Gingeras T. Corbeil J, et al. Among authors: drenkow j. Genome Res. 2001 Jul;11(7):1198-204. doi: 10.1101/gr.gr-1802r. Genome Res. 2001. PMID: 11435401 Free PMC article.

7

Reprogramming of the macrophage transcriptome in response to interferon-gamma and Mycobacterium tuberculosis: signaling roles of nitric oxide synthase-2 and phagocyte oxidase.

Ehrt S, Schnappinger D, Bekiranov S, Drenkow J, Shi S, Gingeras TR, Gaasterland T, Schoolnik G, Nathan C. Ehrt S, et al. Among authors: drenkow j. J Exp Med. 2001 Oct 15;194(8):1123-40. doi: 10.1084/jem.194.8.1123. J Exp Med. 2001. PMID: 11602641 Free PMC article.

8

Large-scale transcriptional activity in chromosomes 21 and 22.

Kapranov P, Cawley SE, Drenkow J, Bekiranov S, Strausberg RL, Fodor SP, Gingeras TR. Kapranov P, et al. Among authors: drenkow j. Science. 2002 May 3;296(5569):916-9. doi: 10.1126/science.1068597. Science. 2002. PMID: 11988577

9

Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of noncoding RNAs.

Cawley S, Bekiranov S, Ng HH, Kapranov P, Sekinger EA, Kampa D, Piccolboni A, Sementchenko V, Cheng J, Williams AJ, Wheeler R, Wong B, Drenkow J, Yamanaka M, Patel S, Brubaker S, Tammana H, Helt G, Struhl K, Gingeras TR. Cawley S, et al. Among authors: drenkow j. Cell. 2004 Feb 20;116(4):499-509. doi: 10.1016/s0092-8674(04)00127-8. Cell. 2004. PMID: 14980218 Free article.

10

Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution.

Cheng J, Kapranov P, Drenkow J, Dike S, Brubaker S, Patel S, Long J, Stern D, Tammana H, Helt G, Sementchenko V, Piccolboni A, Bekiranov S, Bailey DK, Ganesh M, Ghosh S, Bell I, Gerhard DS, Gingeras TR. Cheng J, et al. Among authors: drenkow j. Science. 2005 May 20;308(5725):1149-54. doi: 10.1126/science.1108625. Epub 2005 Mar 24. Science. 2005. PMID: 15790807

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